Factsheet for Bra003407.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64765	Canola	cytosol	94.76	94.76
Bra007520.1-P	Field mustard	cytosol	90.26	91.64
AT3G60250.1	Thale cress	cytosol	89.89	86.96
Bra004856.1-P	Field mustard	cytosol	77.9	79.39
Bra000359.1-P	Field mustard	cytosol	81.27	78.91
Solyc01g088740.2.1	Tomato	cytosol	81.65	76.22
VIT_02s0012g00080.t01	Wine grape	cytosol	74.16	74.44
PGSC0003DMT400004353	Potato	cytosol	80.9	74.23
TraesCS2D01G242000.2	Wheat	cytosol	74.53	73.98
TraesCS2A01G245100.1	Wheat	cytosol	74.53	73.43
Zm00001d021557_P001	Maize	cytosol	74.91	73.26
EER91910	Sorghum	cytosol	71.54	72.9
KXG36270	Sorghum	cytosol	74.91	72.73
Solyc05g050680.2.1	Tomato	nucleus	76.78	71.93
Zm00001d029978_P001	Maize	cytosol	59.18	71.82
Os07t0495100-01	Rice	cytosol	75.28	69.79
HORVU1Hr1G055250.1	Barley	cytosol	71.16	69.09
TraesCS1A01G215700.1	Wheat	cytosol	71.16	69.09
TraesCS1B01G229200.1	Wheat	cytosol	71.16	69.09
TraesCSU01G007300.1	Wheat	cytosol	71.16	69.09
Os10t0564900-01	Rice	cytosol	71.91	68.82
Bra022101.1-P	Field mustard	cytosol	71.16	68.59
Bra040171.1-P	Field mustard	cytosol	70.79	67.26
HORVU2Hr1G092930.1	Barley	cytosol	69.29	66.79
TraesCS2A01G390500.1	Wheat	cytosol	69.29	66.79
TraesCS2B01G408900.1	Wheat	cytosol	69.29	66.79
TraesCS2D01G388200.1	Wheat	cytosol	69.29	66.79
TraesCSU01G129600.1	Wheat	cytosol, mitochondrion	62.55	66.01
TraesCS5A01G545600.3	Wheat	cytosol, mitochondrion	62.55	65.75
Zm00001d006440_P003	Maize	cytosol	73.78	65.23
OQU82060	Sorghum	cytosol	67.04	64.39
TraesCS4B01G379300.1	Wheat	cytosol, mitochondrion	52.06	63.76
Zm00001d002778_P001	Maize	nucleus	55.43	61.67
HORVU4Hr1G090280.3	Barley	cytosol	62.17	61.25
PGSC0003DMT400018024	Potato	mitochondrion	69.29	59.87
GSMUA_Achr4P17850_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	48.31	55.13
Zm00001d000052_P004	Maize	cytosol	57.3	52.94
Bra025463.1-P	Field mustard	cytosol	55.43	52.86
Bra025515.1-P	Field mustard	cytosol	53.18	52.79
Bra012652.1-P	Field mustard	cytosol	53.56	43.87

Protein Annotations

Gene3D:1.10.1820.10	MapMan:18.4.3.9.2	Gene3D:2.20.25.20	EnsemblPlantsGene:Bra003407	EnsemblPlants:Bra003407.1	EnsemblPlants:Bra003407.1-P
InterPro:Casein_kin_II_reg-sub_N	InterPro:Casein_kinase_II_beta_like	InterPro:Casein_kinase_II_reg-sub	GO:GO:0003674	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005956	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0019538	GO:GO:0019887	GO:GO:0030234	GO:GO:0045859	InterPro:IPR016149	UniProt:M4CGS4
PFAM:PF01214	PRINTS:PR00472	ScanProsite:PS01101	PANTHER:PTHR11740	PANTHER:PTHR11740:SF15	SMART:SM01085
SUPFAM:SSF57798	UniParc:UPI0002541790	SEG:seg	:	:	:

Description

AT3G60250 (E=8e-111) CKB3 | CKB3; protein kinase regulator/ transcription factor binding

Coordinates

chrA07:-:13059593..13060743

Molecular Weight (calculated)

29821.9 Da

IEP (calculated)

4.667

GRAVY (calculated)

-0.546

Length

267 amino acids

Sequence
(BLAST)

001: MYKERSGGGG GGSSRSEILN GAVDRKRIND ALSKKLEKSS PSTSRPFAST AKPQLPDVES ETDSEEGSDV SGSEGDDDTS WISWFCNLRG NDFFCEVDED
101: YIQDDFNLCG LSGQVPYYDY ALDLILDVES SNSEMFTEEQ NELVESAAEM LYGLIHVRYI LTTKGMAAMT EKYKNCDFGR CPRVFCCGQS CLPVGQSDIP
201: RSSTVKIYCP KCEDISYPRS KFQGNIDGAY FGTTFPHLFL MTYGNLKPQK PTQKYVPRIF GFKVHKP

Best Arabidopsis Sequence Match ( AT3G60250.1 )
(BLAST)

001: MYKERSGGGG GGSSRSEILG GAIDRKRIND ALNKKLEKSS TSTTTSRVFS SKDKDPFSFT STKTQLPDVE SETDSEGSDV SGSEGDDTSW ISWFCNLRGN
101: DFFCEVDEDY IQDDFNLCGL SGQVPYYDYA LDLILDVDAS NSEMFTDEQH EMVESAAEML YGLIHVRYIL TTKGMAAMTE KYKNCDFGRC PRVFCCGQSC
201: LPVGQSDIPR SSTVKIYCPK CEDISYPRSK FQGNIDGAYF GTTFPHLFLM TYGNLKPQKP TQSYVPKIFG FKVHKP

Arabidopsis Description

CKB3Casein kinase II subunit beta-3 [Source:UniProtKB/Swiss-Prot;Acc:O81275]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.