Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS7A01G299400.3 | |
| TraesCS7B01G188000.1 | |
| TraesCS7D01G295400.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G242000.2 | Wheat | cytosol | 98.89 | 99.63 |
| Zm00001d021557_P001 | Maize | cytosol | 92.62 | 91.94 |
| KXG36270 | Sorghum | cytosol | 91.88 | 90.55 |
| Solyc10g061940.1.1 | Tomato | mitochondrion | 38.75 | 89.74 |
| Os07t0495100-01 | Rice | cytosol | 92.99 | 87.5 |
| Zm00001d006440_P003 | Maize | cytosol | 91.14 | 81.79 |
| KRH57540 | Soybean | nucleus | 76.38 | 79.31 |
| GSMUA_Achr4P30080_001 | Banana | cytosol | 81.92 | 79.29 |
| GSMUA_Achr4P26360_001 | Banana | cytosol | 81.18 | 78.57 |
| GSMUA_AchrUn_... | Banana | cytosol | 80.81 | 78.21 |
| VIT_02s0012g00080.t01 | Wine grape | cytosol | 76.75 | 78.2 |
| KRH04253 | Soybean | nucleus | 76.01 | 78.03 |
| KRH77278 | Soybean | nucleus | 78.97 | 75.09 |
| TraesCS1A01G215700.1 | Wheat | cytosol | 76.01 | 74.91 |
| KRH28210 | Soybean | nucleus | 78.97 | 74.83 |
| PGSC0003DMT400004353 | Potato | cytosol | 80.07 | 74.57 |
| Bra003407.1-P | Field mustard | cytosol | 73.43 | 74.53 |
| Solyc01g088740.2.1 | Tomato | cytosol | 78.6 | 74.48 |
| Solyc05g050680.2.1 | Tomato | nucleus | 78.23 | 74.39 |
| CDY64765 | Canola | cytosol | 72.69 | 73.78 |
| Bra007520.1-P | Field mustard | cytosol | 71.59 | 73.76 |
| CDY41181 | Canola | cytosol | 71.59 | 73.76 |
| CDX71824 | Canola | cytosol | 70.85 | 73.0 |
| PGSC0003DMT400068359 | Potato | cytosol | 76.75 | 72.98 |
| CDX83421 | Canola | cytosol | 73.8 | 72.73 |
| Solyc06g061000.2.1 | Tomato | cytosol | 76.75 | 72.73 |
| Bra000359.1-P | Field mustard | cytosol | 73.8 | 72.73 |
| CDX95610 | Canola | cytosol | 73.43 | 72.36 |
| GSMUA_Achr8P14950_001 | Banana | cytosol | 75.28 | 71.83 |
| KRH57536 | Soybean | cytosol | 67.9 | 71.6 |
| KRH04249 | Soybean | nucleus | 69.0 | 71.37 |
| Bra004856.1-P | Field mustard | cytosol | 69.0 | 71.37 |
| CDX74677 | Canola | cytosol | 70.11 | 71.16 |
| AT2G44680.1 | Thale cress | cytosol | 74.17 | 71.02 |
| CDY48249 | Canola | cytosol | 70.11 | 70.9 |
| CDX78786 | Canola | cytosol | 73.06 | 70.71 |
| TraesCS2A01G390500.1 | Wheat | cytosol | 71.96 | 70.4 |
| Bra040171.1-P | Field mustard | cytosol | 72.69 | 70.11 |
| AT3G60250.1 | Thale cress | cytosol | 70.85 | 69.57 |
| Bra022101.1-P | Field mustard | cytosol | 70.11 | 68.59 |
| AT5G47080.1 | Thale cress | cytosol | 72.32 | 68.29 |
| CDY28980 | Canola | cytosol | 69.74 | 68.23 |
| CDY38414 | Canola | cytosol | 71.22 | 67.96 |
| CDY40582 | Canola | cytosol | 69.0 | 67.75 |
| AT4G17640.1 | Thale cress | cytosol | 69.74 | 67.02 |
| TraesCS5A01G545600.3 | Wheat | cytosol, mitochondrion | 62.73 | 66.93 |
| GSMUA_Achr2P10400_001 | Banana | cytosol | 79.7 | 66.46 |
| CDX90462 | Canola | cytosol | 69.0 | 65.61 |
| CDY09612 | Canola | cytosol | 69.0 | 65.61 |
| CDX77739 | Canola | cytosol | 58.3 | 63.45 |
| VIT_15s0021g01020.t01 | Wine grape | cytosol | 69.0 | 61.11 |
| GSMUA_Achr4P17850_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 51.66 | 59.83 |
| PGSC0003DMT400018024 | Potato | mitochondrion | 67.16 | 58.9 |
| Bra025515.1-P | Field mustard | cytosol | 57.56 | 57.99 |
| CDY64781 | Canola | cytosol | 56.83 | 57.89 |
| CDY48948 | Canola | cytosol | 57.2 | 57.2 |
| Bra025463.1-P | Field mustard | cytosol | 56.83 | 55.0 |
| Solyc10g061930.1.1 | Tomato | nucleus | 33.21 | 54.22 |
| GSMUA_Achr4P17860_001 | Banana | cytosol | 31.0 | 47.73 |
| Bra012652.1-P | Field mustard | cytosol | 54.24 | 45.09 |
Protein Annotations
| Gene3D:1.10.1820.10 | MapMan:18.4.3.9.2 | Gene3D:2.20.25.20 | InterPro:Casein_kin_II_reg-sub_N | InterPro:Casein_kinase_II_beta_like | InterPro:Casein_kinase_II_reg-sub |
| GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005956 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019887 | GO:GO:0030234 |
| InterPro:IPR016149 | PFAM:PF01214 | PRINTS:PR00472 | ScanProsite:PS01101 | PANTHER:PTHR11740 | PANTHER:PTHR11740:SF15 |
| SMART:SM01085 | SUPFAM:SSF57798 | EnsemblPlantsGene:TraesCS2A01G245100 | EnsemblPlants:TraesCS2A01G245100.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr2A:+:352422277..352430307
Molecular Weight (calculated)
30311.3 Da
IEP (calculated)
5.814
GRAVY (calculated)
-0.576
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKQGAAGGA GPDRKRISDA LDKHLEKAAA SPSTSRGSAG ARGNHNRVVV PSSIPKGRCS EGESESDSEA SDVSGSDGED TSWISWYCNL RGNEFFCEVD
101: DDYIQDDFNL CGLSSQVPYY DYALDLILDI ESSHGDIFTE EQNELVESAA EMLYGLIHAR YILTSKGLAA MLEKYKNYDF GRCPRVYCCG QPCLPVGQSD
201: IHRSSTVKIY CPKCEDIYYP RSKYQGNIDG AYFGTTFPHL FLMTYDHLKP QKPSQRYVPR VFGFKLHNHK P
101: DDYIQDDFNL CGLSSQVPYY DYALDLILDI ESSHGDIFTE EQNELVESAA EMLYGLIHAR YILTSKGLAA MLEKYKNYDF GRCPRVYCCG QPCLPVGQSD
201: IHRSSTVKIY CPKCEDIYYP RSKYQGNIDG AYFGTTFPHL FLMTYDHLKP QKPSQRYVPR VFGFKLHNHK P
001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ
Arabidopsis Description
CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.