Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022101.1-P | Field mustard | cytosol | 87.8 | 90.97 |
| CDY28980 | Canola | cytosol | 87.11 | 90.25 |
| CDY40582 | Canola | cytosol | 85.37 | 88.77 |
| CDX77739 | Canola | cytosol | 73.87 | 85.14 |
| AT4G17640.1 | Thale cress | cytosol | 77.35 | 78.72 |
| Zm00001d029978_P001 | Maize | cytosol | 56.79 | 74.09 |
| TraesCS2A01G390500.1 | Wheat | cytosol | 71.08 | 73.65 |
| TraesCS2B01G408900.1 | Wheat | cytosol | 71.08 | 73.65 |
| HORVU2Hr1G092930.1 | Barley | cytosol | 71.08 | 73.65 |
| TraesCS2D01G388200.1 | Wheat | cytosol | 71.08 | 73.65 |
| TraesCS2D01G242000.2 | Wheat | cytosol | 68.29 | 72.86 |
| TraesCS2A01G245100.1 | Wheat | cytosol | 68.29 | 72.32 |
| Zm00001d021557_P001 | Maize | cytosol | 68.29 | 71.79 |
| EER91910 | Sorghum | cytosol | 65.51 | 71.76 |
| KXG36270 | Sorghum | cytosol | 67.94 | 70.91 |
| TraesCSU01G007300.1 | Wheat | cytosol | 67.25 | 70.18 |
| TraesCS1A01G215700.1 | Wheat | cytosol | 67.25 | 70.18 |
| TraesCS1B01G229200.1 | Wheat | cytosol | 67.25 | 70.18 |
| HORVU1Hr1G055250.1 | Barley | cytosol | 66.9 | 69.82 |
| OQU82060 | Sorghum | cytosol | 67.6 | 69.78 |
| Os10t0564900-01 | Rice | cytosol | 67.25 | 69.18 |
| Zm00001d002778_P001 | Maize | nucleus | 57.84 | 69.17 |
| AT2G44680.1 | Thale cress | cytosol | 67.94 | 68.9 |
| AT3G60250.1 | Thale cress | cytosol | 65.16 | 67.75 |
| Os07t0495100-01 | Rice | cytosol | 67.94 | 67.71 |
| TraesCS4B01G379300.1 | Wheat | cytosol, mitochondrion | 49.48 | 65.14 |
| TraesCSU01G129600.1 | Wheat | cytosol, mitochondrion | 56.1 | 63.64 |
| Zm00001d006440_P003 | Maize | cytosol | 66.55 | 63.24 |
| TraesCS5A01G545600.3 | Wheat | cytosol, mitochondrion | 55.4 | 62.6 |
| HORVU4Hr1G090280.3 | Barley | cytosol | 55.75 | 59.04 |
| Zm00001d000052_P004 | Maize | cytosol | 53.66 | 53.29 |
Protein Annotations
| Gene3D:1.10.1820.10 | MapMan:18.4.3.9.2 | Gene3D:2.20.25.20 | EntrezGene:834754 | ProteinID:AED95466.1 | ArrayExpress:AT5G47080 |
| EnsemblPlantsGene:AT5G47080 | RefSeq:AT5G47080 | TAIR:AT5G47080 | RefSeq:AT5G47080-TAIR-G | EnsemblPlants:AT5G47080.1 | TAIR:AT5G47080.1 |
| ProteinID:BAA98103.1 | Symbol:CKB1 | InterPro:Casein_kin_II_reg-sub_N | InterPro:Casein_kinase_II_beta_like | InterPro:Casein_kinase_II_reg-sub | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005956 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019887 | GO:GO:0030234 | GO:GO:0045859 |
| GO:GO:0071900 | InterPro:IPR016149 | EMBL:L22563 | RefSeq:NP_199519.1 | UniProt:P40228 | PFAM:PF01214 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00472 | ScanProsite:PS01101 | PANTHER:PTHR11740 |
| PANTHER:PTHR11740:SF15 | SMART:SM01085 | SUPFAM:SSF57798 | UniParc:UPI000012DC78 | SEG:seg | : |
Description
CKB1Casein kinase II subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:P40228]
Coordinates
chr5:-:19124563..19126694
Molecular Weight (calculated)
32356.6 Da
IEP (calculated)
4.937
GRAVY (calculated)
-0.622
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRDRGTVNS RPEVVDRKRI NDALERPSPS TSRQVNGKGK GTVTAATTTA NLIGKQQSNN INHRDSRSAS LSKNNTVSDD ESDTDSEESD VSGSDGEDTS
101: WISWFCNLRG NEFFCEVDDD YIQDDFNLCG LSSLVPYYEY ALDLILDVES SQGEMFTEEQ NELIESAAEM LYGLIHARYI LTSKGLAAML DKYKNYDFGR
201: CPRVYCCGQP CLPVGQSDLP RSSTVKIYCP KCEDIYYPRS KYQGNIDGAY FGTTFPHLFL MTYGHLKPAK ATQNYVQRVF GFKLHKP
101: WISWFCNLRG NEFFCEVDDD YIQDDFNLCG LSSLVPYYEY ALDLILDVES SQGEMFTEEQ NELIESAAEM LYGLIHARYI LTSKGLAAML DKYKNYDFGR
201: CPRVYCCGQP CLPVGQSDLP RSSTVKIYCP KCEDIYYPRS KYQGNIDGAY FGTTFPHLFL MTYGHLKPAK ATQNYVQRVF GFKLHKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.