Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007520.1-P | Field mustard | cytosol | 85.87 | 90.11 |
| CDY41181 | Canola | cytosol | 85.87 | 90.11 |
| Bra003407.1-P | Field mustard | cytosol | 86.96 | 89.89 |
| CDY64765 | Canola | cytosol | 86.59 | 89.51 |
| CDX71824 | Canola | cytosol | 85.14 | 89.35 |
| AT2G44680.1 | Thale cress | cytosol | 85.14 | 83.04 |
| VIT_02s0012g00080.t01 | Wine grape | cytosol | 71.74 | 74.44 |
| Solyc01g088740.2.1 | Tomato | cytosol | 76.09 | 73.43 |
| PGSC0003DMT400004353 | Potato | cytosol | 75.72 | 71.82 |
| TraesCS2D01G242000.2 | Wheat | cytosol | 69.57 | 71.38 |
| Zm00001d021557_P001 | Maize | cytosol | 70.29 | 71.06 |
| TraesCS2A01G245100.1 | Wheat | cytosol | 69.57 | 70.85 |
| Solyc05g050680.2.1 | Tomato | nucleus | 72.83 | 70.53 |
| KXG36270 | Sorghum | cytosol | 69.93 | 70.18 |
| EER91910 | Sorghum | cytosol | 65.94 | 69.47 |
| Os07t0495100-01 | Rice | cytosol | 71.01 | 68.06 |
| Zm00001d029978_P001 | Maize | cytosol | 53.99 | 67.73 |
| TraesCS1A01G215700.1 | Wheat | cytosol | 67.03 | 67.27 |
| TraesCS1B01G229200.1 | Wheat | cytosol | 67.03 | 67.27 |
| HORVU1Hr1G055250.1 | Barley | cytosol | 67.03 | 67.27 |
| TraesCSU01G007300.1 | Wheat | cytosol | 67.03 | 67.27 |
| Os10t0564900-01 | Rice | cytosol | 67.75 | 67.03 |
| AT5G47080.1 | Thale cress | cytosol | 67.75 | 65.16 |
| HORVU2Hr1G092930.1 | Barley | cytosol | 64.86 | 64.62 |
| TraesCS2A01G390500.1 | Wheat | cytosol | 64.86 | 64.62 |
| TraesCS2B01G408900.1 | Wheat | cytosol | 64.86 | 64.62 |
| TraesCS2D01G388200.1 | Wheat | cytosol | 64.86 | 64.62 |
| TraesCS5A01G545600.3 | Wheat | cytosol, mitochondrion | 59.42 | 64.57 |
| TraesCSU01G129600.1 | Wheat | cytosol, mitochondrion | 59.06 | 64.43 |
| Zm00001d006440_P003 | Maize | cytosol | 69.2 | 63.24 |
| AT4G17640.1 | Thale cress | cytosol | 64.49 | 63.12 |
| TraesCS4B01G379300.1 | Wheat | cytosol, mitochondrion | 49.28 | 62.39 |
| OQU82060 | Sorghum | cytosol | 62.32 | 61.87 |
| HORVU4Hr1G090280.3 | Barley | cytosol | 59.42 | 60.52 |
| Zm00001d002778_P001 | Maize | nucleus | 51.45 | 59.17 |
| PGSC0003DMT400018024 | Potato | mitochondrion | 65.94 | 58.9 |
| GSMUA_Achr4P17850_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 46.38 | 54.7 |
| Zm00001d000052_P004 | Maize | cytosol | 52.9 | 50.52 |
Protein Annotations
| Gene3D:1.10.1820.10 | MapMan:18.4.3.9.2 | Gene3D:2.20.25.20 | EntrezGene:825196 | ProteinID:AEE80030.1 | EMBL:AF068318 |
| EMBL:AK229231 | ArrayExpress:AT3G60250 | EnsemblPlantsGene:AT3G60250 | RefSeq:AT3G60250 | TAIR:AT3G60250 | RefSeq:AT3G60250-TAIR-G |
| EnsemblPlants:AT3G60250.1 | TAIR:AT3G60250.1 | Unigene:At.23774 | EMBL:BT024908 | ProteinID:CAB87862.1 | Symbol:CKB3 |
| InterPro:Casein_kin_II_reg-sub_N | InterPro:Casein_kinase_II_beta_like | InterPro:Casein_kinase_II_reg-sub | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005956 | GO:GO:0006464 | GO:GO:0008134 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0019887 | GO:GO:0030234 | GO:GO:0042752 | GO:GO:0045859 | InterPro:IPR016149 |
| RefSeq:NP_191584.1 | UniProt:O81275 | PFAM:PF01214 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00472 | ScanProsite:PS01101 | PANTHER:PTHR11740 | PANTHER:PTHR11740:SF15 | SMART:SM01085 | SUPFAM:SSF57798 |
| UniParc:UPI000012DC7E | SEG:seg | : | : | : | : |
Description
CKB3Casein kinase II subunit beta-3 [Source:UniProtKB/Swiss-Prot;Acc:O81275]
Coordinates
chr3:-:22270270..22272173
Molecular Weight (calculated)
30800.0 Da
IEP (calculated)
4.820
GRAVY (calculated)
-0.524
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKERSGGGG GGSSRSEILG GAIDRKRIND ALNKKLEKSS TSTTTSRVFS SKDKDPFSFT STKTQLPDVE SETDSEGSDV SGSEGDDTSW ISWFCNLRGN
101: DFFCEVDEDY IQDDFNLCGL SGQVPYYDYA LDLILDVDAS NSEMFTDEQH EMVESAAEML YGLIHVRYIL TTKGMAAMTE KYKNCDFGRC PRVFCCGQSC
201: LPVGQSDIPR SSTVKIYCPK CEDISYPRSK FQGNIDGAYF GTTFPHLFLM TYGNLKPQKP TQSYVPKIFG FKVHKP
101: DFFCEVDEDY IQDDFNLCGL SGQVPYYDYA LDLILDVDAS NSEMFTDEQH EMVESAAEML YGLIHVRYIL TTKGMAAMTE KYKNCDFGRC PRVFCCGQSC
201: LPVGQSDIPR SSTVKIYCPK CEDISYPRSK FQGNIDGAYF GTTFPHLFLM TYGNLKPQKP TQSYVPKIFG FKVHKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.