Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007520.1-P | Field mustard | cytosol | 97.72 | 97.72 |
| CDY41181 | Canola | cytosol | 97.72 | 97.72 |
| CDY64765 | Canola | cytosol | 89.35 | 88.02 |
| AT3G60250.1 | Thale cress | cytosol | 89.35 | 85.14 |
| CDX74677 | Canola | cytosol | 79.47 | 78.28 |
| CDY48249 | Canola | cytosol | 79.09 | 77.61 |
| CDX83421 | Canola | cytosol | 80.61 | 77.09 |
| CDX95610 | Canola | cytosol | 79.85 | 76.36 |
| VIT_02s0012g00080.t01 | Wine grape | cytosol | 74.52 | 73.68 |
| Solyc01g088740.2.1 | Tomato | cytosol | 78.71 | 72.38 |
| TraesCS2D01G242000.2 | Wheat | cytosol | 73.0 | 71.38 |
| PGSC0003DMT400004353 | Potato | cytosol | 78.71 | 71.13 |
| TraesCS2A01G245100.1 | Wheat | cytosol | 73.0 | 70.85 |
| Zm00001d021557_P001 | Maize | cytosol | 73.38 | 70.7 |
| KXG36270 | Sorghum | cytosol | 73.38 | 70.18 |
| EER91910 | Sorghum | cytosol | 69.2 | 69.47 |
| Solyc05g050680.2.1 | Tomato | nucleus | 74.14 | 68.42 |
| CDY40582 | Canola | cytosol | 71.1 | 67.75 |
| Zm00001d029978_P001 | Maize | cytosol | 56.65 | 67.73 |
| Os07t0495100-01 | Rice | cytosol | 74.14 | 67.71 |
| CDY28980 | Canola | cytosol | 70.72 | 67.15 |
| CDX78786 | Canola | cytosol | 71.48 | 67.14 |
| HORVU1Hr1G055250.1 | Barley | cytosol | 69.96 | 66.91 |
| TraesCSU01G007300.1 | Wheat | cytosol | 69.96 | 66.91 |
| TraesCS1A01G215700.1 | Wheat | cytosol | 69.96 | 66.91 |
| TraesCS1B01G229200.1 | Wheat | cytosol | 69.96 | 66.91 |
| Os10t0564900-01 | Rice | cytosol | 70.34 | 66.31 |
| CDY38414 | Canola | cytosol | 70.72 | 65.49 |
| HORVU2Hr1G092930.1 | Barley | cytosol | 68.44 | 64.98 |
| TraesCS2D01G388200.1 | Wheat | cytosol | 68.44 | 64.98 |
| TraesCS2B01G408900.1 | Wheat | cytosol | 68.44 | 64.98 |
| TraesCS2A01G390500.1 | Wheat | cytosol | 68.44 | 64.98 |
| CDY09612 | Canola | cytosol | 69.2 | 63.86 |
| CDX90462 | Canola | cytosol | 69.2 | 63.86 |
| TraesCSU01G129600.1 | Wheat | cytosol, mitochondrion | 60.84 | 63.24 |
| TraesCS5A01G545600.3 | Wheat | cytosol, mitochondrion | 60.46 | 62.6 |
| Zm00001d006440_P003 | Maize | cytosol | 71.86 | 62.58 |
| CDX77739 | Canola | cytosol | 58.94 | 62.25 |
| OQU82060 | Sorghum | cytosol | 65.4 | 61.87 |
| TraesCS4B01G379300.1 | Wheat | cytosol, mitochondrion | 50.19 | 60.55 |
| Zm00001d002778_P001 | Maize | nucleus | 53.99 | 59.17 |
| HORVU4Hr1G090280.3 | Barley | cytosol | 60.84 | 59.04 |
| PGSC0003DMT400018024 | Potato | mitochondrion | 69.2 | 58.9 |
| CDY64781 | Canola | cytosol | 54.75 | 54.14 |
| GSMUA_Achr4P17850_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 47.91 | 53.85 |
| CDY48948 | Canola | cytosol | 53.99 | 52.4 |
| Zm00001d000052_P004 | Maize | cytosol | 55.13 | 50.17 |
Protein Annotations
| Gene3D:1.10.1820.10 | MapMan:18.4.3.9.2 | Gene3D:2.20.25.20 | GO:A0A078C6N4 | EnsemblPlants:CDX71824 | ProteinID:CDX71824 |
| ProteinID:CDX71824.1 | InterPro:Casein_kin_II_reg-sub_N | InterPro:Casein_kinase_II_beta_like | InterPro:Casein_kinase_II_reg-sub | GO:GO:0003674 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005956 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019887 | GO:GO:0030234 | EnsemblPlantsGene:GSBRNA2T00155546001 | InterPro:IPR016149 |
| PFAM:PF01214 | PRINTS:PR00472 | ScanProsite:PS01101 | PANTHER:PTHR11740 | PANTHER:PTHR11740:SF15 | SMART:SM01085 |
| SUPFAM:SSF57798 | UniParc:UPI0004EE6D72 | SEG:seg | : | : | : |
Description
BnaC08g30500D
Coordinates
chrLK031795:+:741353..742962
Molecular Weight (calculated)
29452.3 Da
IEP (calculated)
4.617
GRAVY (calculated)
-0.587
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKERSGGGG GSSRSEIVGG AIDRKRINDA LNKRLEKSST SASKDKHQLP DVESETDSEE GSDVSGSEGD DDDDTSWISW FCNLRGNDFF CEVDEDYIQD
101: DFNLCGLSGQ VPYYEYALDL ILDVESSNSE MFTEEQNELV ESAAEMLYGL IHVRYILTTK GLAAMTEKYK KCDFGRCPRV FCCGQSCLPV GQSDIPRSST
201: VKIYCPKCQD ISYPRSKFQG NIDGAYFGTT FPHLFLMTNG NLKPQKPSQS YVPRIFGFKV HRP
101: DFNLCGLSGQ VPYYEYALDL ILDVESSNSE MFTEEQNELV ESAAEMLYGL IHVRYILTTK GLAAMTEKYK KCDFGRCPRV FCCGQSCLPV GQSDIPRSST
201: VKIYCPKCQD ISYPRSKFQG NIDGAYFGTT FPHLFLMTNG NLKPQKPSQS YVPRIFGFKV HRP
001: MYKERSGGGG GGSSRSEILG GAIDRKRIND ALNKKLEKSS TSTTTSRVFS SKDKDPFSFT STKTQLPDVE SETDSEGSDV SGSEGDDTSW ISWFCNLRGN
101: DFFCEVDEDY IQDDFNLCGL SGQVPYYDYA LDLILDVDAS NSEMFTDEQH EMVESAAEML YGLIHVRYIL TTKGMAAMTE KYKNCDFGRC PRVFCCGQSC
201: LPVGQSDIPR SSTVKIYCPK CEDISYPRSK FQGNIDGAYF GTTFPHLFLM TYGNLKPQKP TQSYVPKIFG FKVHKP
101: DFFCEVDEDY IQDDFNLCGL SGQVPYYDYA LDLILDVDAS NSEMFTDEQH EMVESAAEML YGLIHVRYIL TTKGMAAMTE KYKNCDFGRC PRVFCCGQSC
201: LPVGQSDIPR SSTVKIYCPK CEDISYPRSK FQGNIDGAYF GTTFPHLFLM TYGNLKPQKP TQSYVPKIFG FKVHKP
Arabidopsis Description
CKB3Casein kinase II subunit beta-3 [Source:UniProtKB/Swiss-Prot;Acc:O81275]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.