Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G17640.1 | CDX80051 | AT2G46830.1 | 9724822 |
| AT4G17640.1 | CDX80052 | AT2G46830.1 | 9724822 |
| AT4G17640.1 | CDY41563 | AT2G46830.1 | 9724822 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09612 | Canola | cytosol | 96.14 | 96.14 |
| AT4G17640.1 | Thale cress | cytosol | 89.47 | 90.43 |
| CDX78786 | Canola | cytosol | 77.54 | 78.93 |
| CDY38414 | Canola | cytosol | 78.6 | 78.87 |
| CDY40582 | Canola | cytosol | 76.14 | 78.62 |
| CDY28980 | Canola | cytosol | 75.44 | 77.62 |
| CDX77739 | Canola | cytosol | 64.56 | 73.9 |
| HORVU2Hr1G092930.1 | Barley | cytosol | 68.07 | 70.04 |
| TraesCS2A01G390500.1 | Wheat | cytosol | 68.07 | 70.04 |
| TraesCS2D01G388200.1 | Wheat | cytosol | 68.07 | 70.04 |
| TraesCS2B01G408900.1 | Wheat | cytosol | 68.07 | 70.04 |
| TraesCS2D01G242000.2 | Wheat | cytosol | 65.61 | 69.52 |
| CDX71824 | Canola | cytosol | 63.86 | 69.2 |
| TraesCS2A01G245100.1 | Wheat | cytosol | 65.61 | 69.0 |
| CDY41181 | Canola | cytosol | 63.51 | 68.82 |
| CDX83421 | Canola | cytosol | 66.32 | 68.73 |
| CDX95610 | Canola | cytosol | 66.32 | 68.73 |
| Zm00001d021557_P001 | Maize | cytosol | 65.61 | 68.5 |
| CDY64765 | Canola | cytosol | 63.86 | 68.16 |
| Zm00001d029978_P001 | Maize | cytosol | 52.28 | 67.73 |
| KXG36270 | Sorghum | cytosol | 65.26 | 67.64 |
| OQU82060 | Sorghum | cytosol | 65.61 | 67.27 |
| EER91910 | Sorghum | cytosol | 61.4 | 66.79 |
| Os10t0564900-01 | Rice | cytosol | 65.26 | 66.67 |
| CDX74677 | Canola | cytosol | 62.46 | 66.67 |
| CDY48249 | Canola | cytosol | 62.46 | 66.42 |
| TraesCS1A01G215700.1 | Wheat | cytosol | 63.86 | 66.18 |
| TraesCS1B01G229200.1 | Wheat | cytosol | 63.86 | 66.18 |
| HORVU1Hr1G055250.1 | Barley | cytosol | 63.86 | 66.18 |
| TraesCSU01G007300.1 | Wheat | cytosol | 63.86 | 66.18 |
| Zm00001d002778_P001 | Maize | nucleus | 55.44 | 65.83 |
| CDY64781 | Canola | cytosol | 60.35 | 64.66 |
| Os07t0495100-01 | Rice | cytosol | 65.26 | 64.58 |
| CDY48948 | Canola | cytosol | 59.65 | 62.73 |
| Bra025463.1-P | Field mustard | cytosol | 59.65 | 60.71 |
| Zm00001d006440_P003 | Maize | cytosol | 63.86 | 60.26 |
| TraesCS4B01G379300.1 | Wheat | cytosol, mitochondrion | 44.91 | 58.72 |
| TraesCSU01G129600.1 | Wheat | cytosol, mitochondrion | 51.93 | 58.5 |
| TraesCS5A01G545600.3 | Wheat | cytosol, mitochondrion | 51.58 | 57.87 |
| HORVU4Hr1G090280.3 | Barley | cytosol | 50.53 | 53.14 |
| Zm00001d000052_P004 | Maize | cytosol | 50.53 | 49.83 |
Protein Annotations
| Gene3D:1.10.1820.10 | MapMan:18.4.3.9.2 | Gene3D:2.20.25.20 | GO:A0A078DN73 | EnsemblPlants:CDX90462 | ProteinID:CDX90462 |
| ProteinID:CDX90462.1 | InterPro:Casein_kin_II_reg-sub_N | InterPro:Casein_kinase_II_beta_like | InterPro:Casein_kinase_II_reg-sub | GO:GO:0003674 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005956 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019887 | GO:GO:0030234 | EnsemblPlantsGene:GSBRNA2T00151074001 | InterPro:IPR016149 |
| PFAM:PF01214 | PRINTS:PR00472 | ScanProsite:PS01101 | PANTHER:PTHR11740 | PANTHER:PTHR11740:SF15 | SMART:SM01085 |
| SUPFAM:SSF57798 | UniParc:UPI0004EE9DDF | SEG:seg | : | : | : |
Description
BnaA03g43190D
Coordinates
chrLK031863:-:374493..376477
Molecular Weight (calculated)
32239.6 Da
IEP (calculated)
5.390
GRAVY (calculated)
-0.626
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRERGTVGS KSEVVDRKRL NEVRDNRASH SMSQPVNGKG KAASNSVMIG KQLHDQNNNS RDSRSGSLSK TTISDAVDIS ETDSEESEVS GSEGEDTSWI
101: SWFCNLRGNE FFCEVDDDYI QDDFNLCGLS HQVPYYDYAL DLILDVDSSH GEMFTEEQNE LIESAAEMLY GMIHARYILT SKGLSSMLDK YKNYDFGRCP
201: RVYCCGQPCL PVGQSDIPRA STVKIYCPKC EDVYYPRSKY QGNIDGAYFG TTFPHLFLMT YGHLKPQKAS QSYVPRVFGF KLHKP
101: SWFCNLRGNE FFCEVDDDYI QDDFNLCGLS HQVPYYDYAL DLILDVDSSH GEMFTEEQNE LIESAAEMLY GMIHARYILT SKGLSSMLDK YKNYDFGRCP
201: RVYCCGQPCL PVGQSDIPRA STVKIYCPKC EDVYYPRSKY QGNIDGAYFG TTFPHLFLMT YGHLKPQKAS QSYVPRVFGF KLHKP
001: MYRERGMVGS KSEVVDRKRI NEIHDNRPSH SMSQPVNGKG KVTSTSVLMG KQQLHDKESS RSGSISKTNI SDAVDISDTD SEESEVSGSD GEDTSWISWF
101: CNLRGNEFFC EVDDDYIQDD FNLCGLSHQV PYYDYALDLI LDVESSHGEM FTEEQNELIE SAAEMLYGMI HARFILTSKG LASMLDKYKN YDFGRCPRVY
201: CCGQPCLPVG QSDIPRASTV KIYCPKCEDV YYPRSKYQGN IDGAYFGTTF PHLFLMTYGH LKPQKASQSY TQRVFGFKLH KP
101: CNLRGNEFFC EVDDDYIQDD FNLCGLSHQV PYYDYALDLI LDVESSHGEM FTEEQNELIE SAAEMLYGMI HARFILTSKG LASMLDKYKN YDFGRCPRVY
201: CCGQPCLPVG QSDIPRASTV KIYCPKCEDV YYPRSKYQGN IDGAYFGTTF PHLFLMTYGH LKPQKASQSY TQRVFGFKLH KP
Arabidopsis Description
CKB2Casein kinase II subunit beta-2 [Source:UniProtKB/Swiss-Prot;Acc:P40229]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.