CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040171.1-P	Field mustard	cytosol	96.79	96.44
CDY38414	Canola	cytosol	90.71	89.44
CDX90462	Canola	cytosol	78.93	77.54
CDY09612	Canola	cytosol	78.93	77.54
TraesCS2D01G242000.2	Wheat	cytosol	70.71	73.61
CDY28980	Canola	cytosol	72.5	73.29
TraesCS2A01G245100.1	Wheat	cytosol	70.71	73.06
CDY40582	Canola	cytosol	71.79	72.83
CDY41181	Canola	cytosol	67.86	72.24
CDY64765	Canola	cytosol	68.57	71.91
Zm00001d021557_P001	Maize	cytosol	70.0	71.79
CDX71824	Canola	cytosol	67.14	71.48
EER91910	Sorghum	cytosol	66.43	70.99
KXG36270	Sorghum	cytosol	69.64	70.91
CDX95610	Canola	cytosol	69.29	70.55
CDX83421	Canola	cytosol	69.29	70.55
CDX77739	Canola	cytosol	61.79	69.48
CDY48249	Canola	cytosol	65.0	67.91
CDX74677	Canola	cytosol	64.64	67.79
Os07t0495100-01	Rice	cytosol	69.64	67.71
HORVU1Hr1G055250.1	Barley	cytosol	66.43	67.64
TraesCSU01G007300.1	Wheat	cytosol	66.43	67.64
TraesCS1A01G215700.1	Wheat	cytosol	66.43	67.64
TraesCS1B01G229200.1	Wheat	cytosol	66.43	67.64
Os10t0564900-01	Rice	cytosol	67.14	67.38
Zm00001d029978_P001	Maize	cytosol	52.5	66.82
TraesCS2A01G390500.1	Wheat	cytosol	65.36	66.06
TraesCS2D01G388200.1	Wheat	cytosol	65.36	66.06
TraesCS2B01G408900.1	Wheat	cytosol	65.36	66.06
HORVU2Hr1G092930.1	Barley	cytosol	65.36	66.06
Zm00001d006440_P003	Maize	cytosol	68.93	63.91
TraesCSU01G129600.1	Wheat	cytosol, mitochondrion	57.5	63.64
CDY64781	Canola	cytosol	60.36	63.53
TraesCS5A01G545600.3	Wheat	cytosol, mitochondrion	57.5	63.39
OQU82060	Sorghum	cytosol	62.14	62.59
TraesCS4B01G379300.1	Wheat	cytosol, mitochondrion	48.21	61.93
CDY48948	Canola	cytosol	59.64	61.62
Zm00001d002778_P001	Maize	nucleus	51.43	60.0
HORVU4Hr1G090280.3	Barley	cytosol	56.43	58.3
Zm00001d000052_P004	Maize	cytosol	50.0	48.44

Protein Annotations

Gene3D:1.10.1820.10	MapMan:18.4.3.9.2	Gene3D:2.20.25.20	GO:A0A078CNJ9	EnsemblPlants:CDX78786	ProteinID:CDX78786
ProteinID:CDX78786.1	InterPro:Casein_kin_II_reg-sub_N	InterPro:Casein_kinase_II_beta_like	InterPro:Casein_kinase_II_reg-sub	GO:GO:0003674	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005956	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019887	GO:GO:0030234	EnsemblPlantsGene:GSBRNA2T00131248001	InterPro:IPR016149
PFAM:PF01214	PRINTS:PR00472	ScanProsite:PS01101	PANTHER:PTHR11740	PANTHER:PTHR11740:SF15	SMART:SM01085
SUPFAM:SSF57798	UniParc:UPI0004EF3B8D	SEG:seg	:	:	:

Description

BnaA01g08530D

Coordinates

chrLK031816:+:35538..37409

Molecular Weight (calculated)

31654.0 Da

IEP (calculated)

6.342

GRAVY (calculated)

-0.596

Length

280 amino acids

Sequence
(BLAST)

001: MYKERGTRGS KSEVVVVDQK RVNKAHDNHR ASHSMSHAVN GKGKAVAIGK QLHDLNGRNS RPASLSKPAI SDDVSDTDSE ESEVSGSEGE DTSWVSWFCN
101: LRGNEFFCEV DEDYIQDDFN LCGLNHQVPY YDYALDLILD VDFSQGERFT DEQNELVESA AEMLYGMIHA RYILTSKGLA SMLDKYKNYD FGRCPRVYCC
201: GQPCLPVGQS DIPRSSTVKI YCPKCEDVYY PRSKYQGNID GAYFGTTFPH LFLMTYGHLK PQKAAQSYVP RVFGFKLHKP

Best Arabidopsis Sequence Match ( AT4G17640.2 )
(BLAST)

001: MYRERGMVGS KSEVVDRKRI NEIHDNRPSH SMSQPVNGKG KVTSTSVLMG KQQLHDKESS RSGSISKTNI SDAVDISDTD SEESEVSGSD GEDTSWISWF
101: CNLRGNEFFC EVDDDYIQDD FNLCGLSHQV PYYDYALDLI LDVESSHEEQ NELIESAAEM LYGMIHARFI LTSKGLASML DKYKNYDFGR CPRVYCCGQP
201: CLPVGQSDIP RASTVKIYCP KCEDVYYPRS KYQGNIDGAY FGTTFPHLFL MTYGHLKPQK ASQSYTQRVF GFKLHKP

Arabidopsis Description

CKB2Casein kinase II subunit beta-2 [Source:UniProtKB/Swiss-Prot;Acc:P40229]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.