Factsheet for Os10t0564900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os08t0157600-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G60250.1	Os08t0157600-01	AT2G46830.1	10535927
AT3G60250.1	Os08t0157600-01	AT2G46830.1	14978263
AT3G60250.1	Os08t0157600-01	AT2G46830.1	9724822
AT4G17640.1	Os08t0157600-01	AT2G46830.1	9724822
AT5G47080.1	Os08t0157600-01	AT2G46830.1	9724822

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91910	Sorghum	cytosol	86.02	91.6
Zm00001d029978_P001	Maize	cytosol	69.89	88.64
HORVU1Hr1G055250.1	Barley	cytosol	86.74	88.0
TraesCS1A01G215700.1	Wheat	cytosol	86.38	87.64
TraesCSU01G007300.1	Wheat	cytosol	86.38	87.64
TraesCS1B01G229200.1	Wheat	cytosol	86.38	87.64
Solyc10g061940.1.1	Tomato	mitochondrion	36.2	86.32
KRH57540	Soybean	nucleus	72.04	77.01
GSMUA_Achr4P26360_001	Banana	cytosol	76.34	76.07
GSMUA_AchrUn_...	Banana	cytosol	76.34	76.07
GSMUA_Achr4P30080_001	Banana	cytosol	75.99	75.71
VIT_02s0012g00080.t01	Wine grape	cytosol	71.33	74.81
KRH04253	Soybean	nucleus	70.61	74.62
KRH77278	Soybean	nucleus	74.19	72.63
Os07t0495100-01	Rice	cytosol	74.91	72.57
KRH28210	Soybean	nucleus	74.19	72.38
CDY64765	Canola	cytosol	69.18	72.28
Bra003407.1-P	Field mustard	cytosol	68.82	71.91
Bra007520.1-P	Field mustard	cytosol	67.38	71.48
CDY41181	Canola	cytosol	67.38	71.48
Bra000359.1-P	Field mustard	cytosol	70.25	71.27
CDX83421	Canola	cytosol	69.89	70.91
Solyc05g050680.2.1	Tomato	nucleus	72.04	70.53
KRH57536	Soybean	cytosol	64.87	70.43
CDX71824	Canola	cytosol	66.31	70.34
Solyc01g088740.2.1	Tomato	cytosol	72.04	70.28
Bra004856.1-P	Field mustard	cytosol	65.95	70.23
CDX95610	Canola	cytosol	69.18	70.18
CDX74677	Canola	cytosol	67.03	70.04
KRH04249	Soybean	nucleus	65.59	69.85
PGSC0003DMT400004353	Potato	cytosol	72.76	69.76
CDY48249	Canola	cytosol	66.31	69.03
GSMUA_Achr8P14950_001	Banana	cytosol	70.25	69.01
AT2G44680.1	Thale cress	cytosol	69.53	68.55
PGSC0003DMT400068359	Potato	cytosol	69.53	68.07
AT3G60250.1	Thale cress	cytosol	67.03	67.75
Solyc06g061000.2.1	Tomato	cytosol	69.18	67.48
AT5G47080.1	Thale cress	cytosol	69.18	67.25
CDX78786	Canola	cytosol	67.38	67.14
Zm00001d000052_P004	Maize	cytosol	69.18	66.78
Bra040171.1-P	Field mustard	cytosol	67.03	66.55
Bra022101.1-P	Field mustard	cytosol	65.59	66.06
CDY28980	Canola	cytosol	65.23	65.7
CDY38414	Canola	cytosol	66.67	65.49
CDY09612	Canola	cytosol	66.67	65.26
CDX90462	Canola	cytosol	66.67	65.26
CDY40582	Canola	cytosol	64.52	65.22
AT4G17640.1	Thale cress	cytosol	65.23	64.54
GSMUA_Achr2P10400_001	Banana	cytosol	74.91	64.31
CDX77739	Canola	cytosol	54.84	61.45
VIT_15s0021g01020.t01	Wine grape	cytosol	62.72	57.19
GSMUA_Achr4P17850_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	47.31	56.41
CDY64781	Canola	cytosol	53.41	56.02
PGSC0003DMT400018024	Potato	mitochondrion	61.29	55.34
Bra025515.1-P	Field mustard	cytosol	52.69	54.65
Bra025463.1-P	Field mustard	cytosol	54.48	54.29
CDY48948	Canola	cytosol	52.69	54.24
Solyc10g061930.1.1	Tomato	nucleus	29.39	49.4
GSMUA_Achr4P17860_001	Banana	cytosol	29.03	46.02
Bra012652.1-P	Field mustard	cytosol	51.61	44.17

Protein Annotations

Gene3D:1.10.1820.10	MapMan:18.4.3.9.2	Gene3D:2.20.25.20	EntrezGene:4349414	ProteinID:ABB47994.1	EMBL:AK111555
ProteinID:BAF27252.1	ProteinID:BAT12099.1	InterPro:Casein_kin_II_reg-sub_N	InterPro:Casein_kinase_II_beta_like	InterPro:Casein_kinase_II_reg-sub	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005956	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	GO:GO:0019887	GO:GO:0030234	GO:GO:0045859	InterPro:IPR016149	EnsemblPlantsGene:Os10g0564900
EnsemblPlants:Os10t0564900-01	PFAM:PF01214	PRINTS:PR00472	ScanProsite:PS01101	PANTHER:PTHR11740	PANTHER:PTHR11740:SF5
UniProt:Q336R6	SMART:SM01085	SUPFAM:SSF57798	UniParc:UPI00005E1FAB	RefSeq:XP_015614914.1	SEG:seg

Description

Similar to Protein kinase CK2 regulatory subunit CK2B2. (Os10t0564900-01)

Coordinates

chr10:+:22308996..22313829

Molecular Weight (calculated)

31196.5 Da

IEP (calculated)

4.962

GRAVY (calculated)

-0.542

Length

279 amino acids

Sequence
(BLAST)

001: MSGAYRDRGF GGAAAEMDRK RIKDVLEKHL DRSSPSTSRG AAVAKERDRL AAAGGKLPAP LGKAGKVSDG EEFETDSEDS DVSGSEGEDT SWISWFCSLR
101: GNEFFCEIDD DYIQDDFNLC GLSNQVPYYD YALDLILDIE SSNGDVFTEE QNELIESSAE MLYGLIHARY ILTSKGLAAM LEKFKNYDFG RCPRVYCCGQ
201: PCLPAGQSDI PRSSTVKIYC PKCEDLHYPR SKYQGNIDGA YFGTTFPHLF LMTYPHLKPQ KPSQQYVPKV FGFKLHKQS

Best Arabidopsis Sequence Match ( AT2G44680.1 )
(BLAST)

001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ

Arabidopsis Description

CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.