Factsheet for GSMUA_AchrUn_randomP04810_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P26360_001	Banana	cytosol	91.43	91.43
GSMUA_Achr4P30080_001	Banana	cytosol	89.64	89.64
TraesCS2D01G242000.2	Wheat	cytosol	78.21	81.41
Zm00001d021557_P001	Maize	cytosol	78.93	80.95
TraesCS2A01G245100.1	Wheat	cytosol	78.21	80.81
KXG36270	Sorghum	cytosol	78.93	80.36
EER91910	Sorghum	cytosol	74.29	79.39
Zm00001d029978_P001	Maize	cytosol	61.79	78.64
GSMUA_Achr2P10400_001	Banana	cytosol	90.71	78.15
GSMUA_Achr8P14950_001	Banana	cytosol	78.57	77.46
Os07t0495100-01	Rice	cytosol	79.29	77.08
TraesCS1A01G215700.1	Wheat	cytosol	75.36	76.73
TraesCSU01G007300.1	Wheat	cytosol	75.36	76.73
TraesCS1B01G229200.1	Wheat	cytosol	75.36	76.73
HORVU1Hr1G055250.1	Barley	cytosol	75.0	76.36
Os10t0564900-01	Rice	cytosol	76.07	76.34
HORVU2Hr1G092930.1	Barley	cytosol	72.86	73.65
TraesCS2A01G390500.1	Wheat	cytosol	72.86	73.65
TraesCS2B01G408900.1	Wheat	cytosol	72.86	73.65
TraesCS2D01G388200.1	Wheat	cytosol	72.86	73.65
Zm00001d006440_P003	Maize	cytosol	77.14	71.52
OQU82060	Sorghum	cytosol	70.71	71.22
Zm00001d002778_P001	Maize	nucleus	59.29	69.17
TraesCSU01G129600.1	Wheat	cytosol, mitochondrion	61.79	68.38
TraesCS5A01G545600.3	Wheat	cytosol, mitochondrion	61.79	68.11
TraesCS4B01G379300.1	Wheat	cytosol, mitochondrion	52.5	67.43
HORVU4Hr1G090280.3	Barley	cytosol	61.07	63.1
GSMUA_Achr4P17850_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	51.79	61.97
CDY64781	Canola	cytosol	56.43	59.4
Bra025515.1-P	Field mustard	cytosol	56.43	58.74
CDY48948	Canola	cytosol	56.79	58.67
GSMUA_Achr4P17860_001	Banana	cytosol	36.43	57.95
Zm00001d000052_P004	Maize	cytosol	58.93	57.09
GSMUA_Achr6P11870_001	Banana	cytosol, plastid	53.21	51.38
GSMUA_Achr2P21300_001	Banana	cytosol	49.64	49.29
Bra012652.1-P	Field mustard	cytosol	54.64	46.93

Protein Annotations

Gene3D:1.10.1820.10	MapMan:18.4.3.9.2	Gene3D:2.20.25.20	InterPro:Casein_kin_II_reg-sub_N	InterPro:Casein_kinase_II_beta_like	InterPro:Casein_kinase_II_reg-sub
GO:GO:0003674	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005956	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019887	GO:GO:0030234
GO:GO:0045859	EnsemblPlantsGene:GSMUA_AchrUn_randomG04810_001	EnsemblPlants:GSMUA_AchrUn_randomP04810_001	EnsemblPlants:GSMUA_AchrUn_randomT04810_001	InterPro:IPR016149	UniProt:M0U6E3
PFAM:PF01214	PRINTS:PR00472	ScanProsite:PS01101	PANTHER:PTHR11740	PANTHER:PTHR11740:SF15	SMART:SM01085
SUPFAM:SSF57798	UniParc:UPI0002950934	SEG:seg	:	:	:

Description

Casein kinase II subunit beta [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04810_001]

Coordinates

chrchrUn_random:-:18927776..18950894

Molecular Weight (calculated)

31780.3 Da

IEP (calculated)

5.251

GRAVY (calculated)

-0.663

Length

280 amino acids

Sequence
(BLAST)

001: MYRERGGCGS KVEIGAADRK RINDALDRHL ERSSPSTSRG LNGKEKGRLS MPSVNSGKQP EHRTLSKSKL SDEESETDSE ESDVSGSDGE DTSWISWFCN
101: LRGNEFFCEV DDEYIQDDFN LCGLSSQVPY YDYALDLILD VESSNGDMFT EEQNELVESA AEMLYGLIHV RYILTSKGMA AMLEKFKNYD FGRCPRVYCC
201: GQPCLPLGQS DIPRSSTVKI YCPKCEDVYY PRSKYQGNID GAYFGTTFPH LFLMTYGHLK PQKPSQRYVP RVFGFKIHKP

Best Arabidopsis Sequence Match ( AT5G47080.1 )
(BLAST)

001: MYRDRGTVNS RPEVVDRKRI NDALERPSPS TSRQVNGKGK GTVTAATTTA NLIGKQQSNN INHRDSRSAS LSKNNTVSDD ESDTDSEESD VSGSDGEDTS
101: WISWFCNLRG NEFFCEVDDD YIQDDFNLCG LSSLVPYYEY ALDLILDVES SQGEMFTEEQ NELIESAAEM LYGLIHARYI LTSKGLAAML DKYKNYDFGR
201: CPRVYCCGQP CLPVGQSDLP RSSTVKIYCP KCEDIYYPRS KYQGNIDGAY FGTTFPHLFL MTYGHLKPAK ATQNYVQRVF GFKLHKP

Arabidopsis Description

CKB1Casein kinase II subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:P40228]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.