Factsheet for GSMUA_Achr4P26360_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	91.43	91.43
GSMUA_Achr4P30080_001	Banana	cytosol	90.36	90.36
TraesCS2D01G242000.2	Wheat	cytosol	78.57	81.78
Zm00001d021557_P001	Maize	cytosol	79.64	81.69
TraesCS2A01G245100.1	Wheat	cytosol	78.57	81.18
KXG36270	Sorghum	cytosol	79.64	81.09
GSMUA_Achr8P14950_001	Banana	cytosol	81.07	79.93
GSMUA_Achr2P10400_001	Banana	cytosol	92.5	79.69
EER91910	Sorghum	cytosol	73.57	78.63
Os07t0495100-01	Rice	cytosol	80.0	77.78
Zm00001d029978_P001	Maize	cytosol	61.07	77.73
Os10t0564900-01	Rice	cytosol	76.07	76.34
TraesCSU01G007300.1	Wheat	cytosol	74.29	75.64
TraesCS1B01G229200.1	Wheat	cytosol	74.29	75.64
TraesCS1A01G215700.1	Wheat	cytosol	74.29	75.64
HORVU1Hr1G055250.1	Barley	cytosol	73.93	75.27
TraesCS2D01G388200.1	Wheat	cytosol	72.86	73.65
HORVU2Hr1G092930.1	Barley	cytosol	72.86	73.65
TraesCS2B01G408900.1	Wheat	cytosol	72.86	73.65
TraesCS2A01G390500.1	Wheat	cytosol	72.86	73.65
Zm00001d006440_P003	Maize	cytosol	77.86	72.19
OQU82060	Sorghum	cytosol	70.36	70.86
Zm00001d002778_P001	Maize	nucleus	59.29	69.17
TraesCSU01G129600.1	Wheat	cytosol, mitochondrion	60.36	66.8
TraesCS5A01G545600.3	Wheat	cytosol, mitochondrion	60.36	66.54
TraesCS4B01G379300.1	Wheat	cytosol, mitochondrion	51.07	65.6
HORVU4Hr1G090280.3	Barley	cytosol	60.0	61.99
GSMUA_Achr4P17860_001	Banana	cytosol	38.93	61.93
GSMUA_Achr4P17850_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	50.71	60.68
CDY64781	Canola	cytosol	56.07	59.02
Bra025515.1-P	Field mustard	cytosol	55.71	57.99
CDY48948	Canola	cytosol	55.71	57.56
Zm00001d000052_P004	Maize	cytosol	58.93	57.09
GSMUA_Achr6P11870_001	Banana	cytosol, plastid	53.21	51.38
GSMUA_Achr2P21300_001	Banana	cytosol	48.57	48.23
Bra012652.1-P	Field mustard	cytosol	54.64	46.93

Protein Annotations

Gene3D:1.10.1820.10	MapMan:18.4.3.9.2	Gene3D:2.20.25.20	InterPro:Casein_kin_II_reg-sub_N	InterPro:Casein_kinase_II_beta_like	InterPro:Casein_kinase_II_reg-sub
GO:GO:0003674	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005956	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019887	GO:GO:0030234
GO:GO:0045859	EnsemblPlantsGene:GSMUA_Achr4G26360_001	EnsemblPlants:GSMUA_Achr4P26360_001	EnsemblPlants:GSMUA_Achr4T26360_001	InterPro:IPR016149	UniProt:M0SS98
PFAM:PF01214	PRINTS:PR00472	ScanProsite:PS01101	PANTHER:PTHR11740	PANTHER:PTHR11740:SF15	SMART:SM01085
SUPFAM:SSF57798	UniParc:UPI00029602DF	SEG:seg	:	:	:

Description

Putative casein kinase II subunit beta-4 [Source:GMGC_GENE;Acc:GSMUA_Achr4G26360_001]

Coordinates

chr4:+:25709168..25712477

Molecular Weight (calculated)

31924.5 Da

IEP (calculated)

5.432

GRAVY (calculated)

-0.626

Length

280 amino acids

Sequence
(BLAST)

001: MYRDRGGCGS RVEIGAVDRK RINDALDKHL EKSSPSTSRF LNGKEKDRLS VLSTSSGKQP EHRLVSKNKC SNEESETDSE ESDVSGSDGE DTSWISWFCN
101: LRGNEFFCEV DEEYIQDDFN LCGLSSQVPY YDYALDLILD VESSHGDMFT EEQNELVESA AEMLYGLIHV RYILTSKGMA AMLEKFKNYD FGRCPRVYCC
201: GQPCLPVGQS DIPRSSTVKI YCPKCEDIFY PRSKYQGNID GAYFGTTFPH LFLMTYGHLK PQKPSQRYVP RVFGYKIHKP

Best Arabidopsis Sequence Match ( AT2G44680.1 )
(BLAST)

001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ

Arabidopsis Description

CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.