Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d024546_P001 | |
| Zm00001d049543_P003 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36270 | Sorghum | cytosol | 97.8 | 97.09 |
| TraesCS2D01G242000.2 | Wheat | cytosol | 92.31 | 93.68 |
| TraesCS2A01G245100.1 | Wheat | cytosol | 91.94 | 92.62 |
| Solyc10g061940.1.1 | Tomato | mitochondrion | 38.1 | 88.89 |
| Os07t0495100-01 | Rice | cytosol | 93.41 | 88.54 |
| Zm00001d006440_P003 | Maize | cytosol | 96.7 | 87.42 |
| KRH57540 | Soybean | nucleus | 76.92 | 80.46 |
| GSMUA_Achr4P26360_001 | Banana | cytosol | 81.69 | 79.64 |
| GSMUA_Achr4P30080_001 | Banana | cytosol | 81.69 | 79.64 |
| GSMUA_AchrUn_... | Banana | cytosol | 80.95 | 78.93 |
| VIT_02s0012g00080.t01 | Wine grape | cytosol | 76.56 | 78.57 |
| KRH04253 | Soybean | nucleus | 75.46 | 78.03 |
| Zm00001d029978_P001 | Maize | cytosol | 61.9 | 76.82 |
| KRH77278 | Soybean | nucleus | 79.12 | 75.79 |
| KRH28210 | Soybean | nucleus | 79.12 | 75.52 |
| Solyc05g050680.2.1 | Tomato | nucleus | 78.39 | 75.09 |
| PGSC0003DMT400004353 | Potato | cytosol | 79.85 | 74.91 |
| Bra003407.1-P | Field mustard | cytosol | 73.26 | 74.91 |
| Solyc01g088740.2.1 | Tomato | cytosol | 78.39 | 74.83 |
| CDY64765 | Canola | cytosol | 72.53 | 74.16 |
| CDY41181 | Canola | cytosol | 71.43 | 74.14 |
| Bra007520.1-P | Field mustard | cytosol | 71.43 | 74.14 |
| PGSC0003DMT400068359 | Potato | cytosol | 76.92 | 73.68 |
| Solyc06g061000.2.1 | Tomato | cytosol | 76.92 | 73.43 |
| CDX71824 | Canola | cytosol | 70.7 | 73.38 |
| Bra000359.1-P | Field mustard | cytosol | 73.63 | 73.09 |
| CDX83421 | Canola | cytosol | 73.26 | 72.73 |
| Bra004856.1-P | Field mustard | cytosol | 69.6 | 72.52 |
| CDX95610 | Canola | cytosol | 72.89 | 72.36 |
| CDX74677 | Canola | cytosol | 70.7 | 72.28 |
| GSMUA_Achr8P14950_001 | Banana | cytosol | 75.09 | 72.18 |
| AT2G44680.1 | Thale cress | cytosol | 73.99 | 71.38 |
| CDY48249 | Canola | cytosol | 69.96 | 71.27 |
| KRH57536 | Soybean | cytosol | 67.03 | 71.21 |
| KRH04249 | Soybean | nucleus | 68.13 | 70.99 |
| AT3G60250.1 | Thale cress | cytosol | 71.06 | 70.29 |
| CDX78786 | Canola | cytosol | 71.79 | 70.0 |
| Bra040171.1-P | Field mustard | cytosol | 71.43 | 69.39 |
| Bra022101.1-P | Field mustard | cytosol | 69.6 | 68.59 |
| AT5G47080.1 | Thale cress | cytosol | 71.79 | 68.29 |
| CDY28980 | Canola | cytosol | 69.23 | 68.23 |
| CDY38414 | Canola | cytosol | 70.7 | 67.96 |
| CDY40582 | Canola | cytosol | 68.5 | 67.75 |
| GSMUA_Achr2P10400_001 | Banana | cytosol | 79.85 | 67.08 |
| AT4G17640.1 | Thale cress | cytosol | 68.86 | 66.67 |
| Zm00001d002778_P001 | Maize | nucleus | 58.24 | 66.25 |
| CDY09612 | Canola | cytosol | 68.5 | 65.61 |
| CDX90462 | Canola | cytosol | 68.5 | 65.61 |
| CDX77739 | Canola | cytosol | 57.88 | 63.45 |
| VIT_15s0021g01020.t01 | Wine grape | cytosol | 69.96 | 62.42 |
| GSMUA_Achr4P17850_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 51.65 | 60.26 |
| PGSC0003DMT400018024 | Potato | mitochondrion | 67.77 | 59.87 |
| Bra025515.1-P | Field mustard | cytosol | 57.51 | 58.36 |
| CDY64781 | Canola | cytosol | 56.78 | 58.27 |
| CDY48948 | Canola | cytosol | 57.14 | 57.56 |
| Bra025463.1-P | Field mustard | cytosol | 57.14 | 55.71 |
| Zm00001d000052_P004 | Maize | cytosol | 58.97 | 55.71 |
| Solyc10g061930.1.1 | Tomato | nucleus | 32.97 | 54.22 |
| GSMUA_Achr4P17860_001 | Banana | cytosol | 31.87 | 49.43 |
| Bra012652.1-P | Field mustard | cytosol | 54.21 | 45.4 |
Protein Annotations
| Gene3D:1.10.1820.10 | MapMan:18.4.3.9.2 | Gene3D:2.20.25.20 | EntrezGene:541824 | UniProt:B6TGH2 | InterPro:Casein_kin_II_reg-sub_N |
| InterPro:Casein_kinase_II_beta_like | InterPro:Casein_kinase_II_reg-sub | EMBL:EU964087 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005956 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0019887 |
| GO:GO:0030234 | GO:GO:0045859 | InterPro:IPR016149 | ProteinID:ONM57511.1 | PFAM:PF01214 | PRINTS:PR00472 |
| ScanProsite:PS01101 | PANTHER:PTHR11740 | PANTHER:PTHR11740:SF15 | SMART:SM01085 | SUPFAM:SSF57798 | UniParc:UPI000182E01C |
| EnsemblPlantsGene:Zm00001d021557 | EnsemblPlants:Zm00001d021557_P001 | EnsemblPlants:Zm00001d021557_T001 | SEG:seg | : | : |
Description
Casein kinase II subunit beta-1
Coordinates
chr7:-:155895169..155897978
Molecular Weight (calculated)
30505.7 Da
IEP (calculated)
5.579
GRAVY (calculated)
-0.527
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKQGGAGGG AGLDRKRIND ALDKHLEKAV ASPSTSRGSA GGGRDHHRLV VPSSVSSIPK GRCSEGESDS DSEASDVSGS DGEDTSWISW YCNLRGNEFF
101: CEVDDDYIQD DFNLCGLSSQ VPYYDYALDL ILDIESSHGD MFTEEQNELV ESAAEMLYGL IHARYILTSK GLAAMLEKYK NYDFGRCPRV YCCGQPCLPV
201: GQSDIHRSST VKIYCPKCED IYYPRSKYQG NIDGAYFGTT FPHLFLMTYE HLKPQKLSQR YVPRVFGFKL HKP
101: CEVDDDYIQD DFNLCGLSSQ VPYYDYALDL ILDIESSHGD MFTEEQNELV ESAAEMLYGL IHARYILTSK GLAAMLEKYK NYDFGRCPRV YCCGQPCLPV
201: GQSDIHRSST VKIYCPKCED IYYPRSKYQG NIDGAYFGTT FPHLFLMTYE HLKPQKLSQR YVPRVFGFKL HKP
001: MYRDRGTVNS RPEVVDRKRI NDALERPSPS TSRQVNGKGK GTVTAATTTA NLIGKQQSNN INHRDSRSAS LSKNNTVSDD ESDTDSEESD VSGSDGEDTS
101: WISWFCNLRG NEFFCEVDDD YIQDDFNLCG LSSLVPYYEY ALDLILDVES SQGEMFTEEQ NELIESAAEM LYGLIHARYI LTSKGLAAML DKYKNYDFGR
201: CPRVYCCGQP CLPVGQSDLP RSSTVKIYCP KCEDIYYPRS KYQGNIDGAY FGTTFPHLFL MTYGHLKPAK ATQNYVQRVF GFKLHKP
101: WISWFCNLRG NEFFCEVDDD YIQDDFNLCG LSSLVPYYEY ALDLILDVES SQGEMFTEEQ NELIESAAEM LYGLIHARYI LTSKGLAAML DKYKNYDFGR
201: CPRVYCCGQP CLPVGQSDLP RSSTVKIYCP KCEDIYYPRS KYQGNIDGAY FGTTFPHLFL MTYGHLKPAK ATQNYVQRVF GFKLHKP
Arabidopsis Description
CKB1Casein kinase II subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:P40228]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.