CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04249	Soybean	nucleus	96.11	94.27
KRH57540	Soybean	nucleus	77.04	75.86
KRH04253	Soybean	nucleus	75.1	73.11
KRH77278	Soybean	nucleus	78.6	70.88
KRH28210	Soybean	nucleus	78.6	70.63
TraesCS2D01G242000.2	Wheat	cytosol	71.6	68.4
TraesCS2A01G245100.1	Wheat	cytosol	71.6	67.9
Zm00001d021557_P001	Maize	cytosol	71.21	67.03
EER91910	Sorghum	cytosol	68.09	66.79
KXG36270	Sorghum	cytosol	71.21	66.55
TraesCSU01G007300.1	Wheat	cytosol	70.82	66.18
TraesCS1B01G229200.1	Wheat	cytosol	70.82	66.18
TraesCS1A01G215700.1	Wheat	cytosol	70.82	66.18
Zm00001d029978_P001	Maize	cytosol	56.42	65.91
HORVU1Hr1G055250.1	Barley	cytosol	70.43	65.82
Os10t0564900-01	Rice	cytosol	70.43	64.87
Os07t0495100-01	Rice	cytosol	71.21	63.54
TraesCS2A01G390500.1	Wheat	cytosol	68.09	63.18
TraesCS2B01G408900.1	Wheat	cytosol	68.09	63.18
TraesCS2D01G388200.1	Wheat	cytosol	68.09	63.18
HORVU2Hr1G092930.1	Barley	cytosol	68.09	63.18
OQU82060	Sorghum	cytosol	66.93	61.87
TraesCSU01G129600.1	Wheat	cytosol, mitochondrion	59.53	60.47
TraesCS5A01G545600.3	Wheat	cytosol, mitochondrion	59.53	60.24
Zm00001d002778_P001	Maize	nucleus	56.03	60.0
Zm00001d006440_P003	Maize	cytosol	69.65	59.27
TraesCS4B01G379300.1	Wheat	cytosol, mitochondrion	49.42	58.26
HORVU4Hr1G090280.3	Barley	cytosol	58.37	55.35
GSMUA_Achr4P17850_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	47.47	52.14
Zm00001d000052_P004	Maize	cytosol	54.86	48.79

Protein Annotations

Gene3D:1.10.1820.10	EntrezGene:100789357	MapMan:18.4.3.9.2	Gene3D:2.20.25.20	EMBL:ACUP02002855	InterPro:Casein_kin_II_reg-sub_N
InterPro:Casein_kinase_II_beta_like	InterPro:Casein_kinase_II_reg-sub	EnsemblPlantsGene:GLYMA_05G067100	GO:GO:0003674	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005956	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0019538	GO:GO:0019887	GO:GO:0030234	GO:GO:0045859	UniProt:I1K0X3	InterPro:IPR016149
EnsemblPlants:KRH57536	ProteinID:KRH57536	ProteinID:KRH57536.1	PFAM:PF01214	PRINTS:PR00472	ScanProsite:PS01101
PANTHER:PTHR11740	PANTHER:PTHR11740:SF15	SMART:SM01085	SUPFAM:SSF57798	UniParc:UPI00023C57FF	SEG:seg

Description

hypothetical protein

Coordinates

chr5:+:6774018..6777149

Molecular Weight (calculated)

29426.5 Da

IEP (calculated)

5.616

GRAVY (calculated)

-0.589

Length

257 amino acids

Sequence
(BLAST)

001: MNDYKGREGE SSVVVVRKRF KEKQQPCPST RPIINQQHRR SASLPNTQYE ESETDVEVSD VSVSEGDDTS WISWFCNLRG NEFFCEVDDD FVQDDFNLCG
101: LSSQVPYYDY ALDLILDVES SHGDTFTEDQ NELIESAAEM LYGLIHARYI LTSKGMAAML HKYKNYNFGR CPRVFCSGQP CLPVGQSDVP RSSTVKIYCP
201: RCEDMYHPKS KYQGNIDGAY FGATFPHLFL MTYGNLKPQK QSQNYVPRVF GFKVHKS

Best Arabidopsis Sequence Match ( AT2G44680.1 )
(BLAST)

001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ

Arabidopsis Description

CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.