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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS7A01G299400.3
TraesCS7B01G188000.1
TraesCS7D01G295400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G60250.1 TraesCS7A01G299400.3 AT2G46830.1 10535927
AT3G60250.1 TraesCS7B01G188000.1 AT2G46830.1 10535927
AT3G60250.1 TraesCS7D01G295400.1 AT2G46830.1 10535927
AT3G60250.1 TraesCS7A01G299400.3 AT2G46830.1 14978263
AT3G60250.1 TraesCS7B01G188000.1 AT2G46830.1 14978263
AT3G60250.1 TraesCS7D01G295400.1 AT2G46830.1 14978263
AT3G60250.1 TraesCS7A01G299400.3 AT2G46830.1 9724822
AT3G60250.1 TraesCS7B01G188000.1 AT2G46830.1 9724822
AT3G60250.1 TraesCS7D01G295400.1 AT2G46830.1 9724822
AT4G17640.1 TraesCS7A01G299400.3 AT2G46830.1 9724822
AT4G17640.1 TraesCS7B01G188000.1 AT2G46830.1 9724822
AT4G17640.1 TraesCS7D01G295400.1 AT2G46830.1 9724822
AT5G47080.1 TraesCS7A01G299400.3 AT2G46830.1 9724822
AT5G47080.1 TraesCS7B01G188000.1 AT2G46830.1 9724822
AT5G47080.1 TraesCS7D01G295400.1 AT2G46830.1 9724822
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCSU01G129600.1 Wheat cytosol, mitochondrion 95.41 82.21
TraesCS5A01G545600.3 Wheat cytosol, mitochondrion 94.5 81.1
HORVU4Hr1G090280.3 Barley cytosol 91.74 73.8
Solyc10g061940.1.1 Tomato mitochondrion 30.28 56.41
KRH57540 Soybean nucleus 66.51 55.56
KRH04253 Soybean nucleus 65.14 53.79
VIT_02s0012g00080.t01 Wine grape cytosol 64.68 53.01
TraesCS1B01G229200.1 Wheat cytosol 66.51 52.73
GSMUA_AchrUn_... Banana cytosol 67.43 52.5
Bra003407.1-P Field mustard cytosol 63.76 52.06
CDY64765 Canola cytosol 63.76 52.06
KRH77278 Soybean nucleus 67.89 51.93
KRH28210 Soybean nucleus 67.89 51.75
CDX74677 Canola cytosol 63.3 51.69
Bra000359.1-P Field mustard cytosol 65.14 51.64
CDX83421 Canola cytosol 65.14 51.64
CDX95610 Canola cytosol 65.14 51.64
CDY48249 Canola cytosol 63.3 51.49
Bra007520.1-P Field mustard cytosol 61.93 51.33
CDY41181 Canola cytosol 61.93 51.33
Bra004856.1-P Field mustard cytosol 61.47 51.15
GSMUA_Achr4P30080_001 Banana cytosol 65.6 51.07
GSMUA_Achr4P26360_001 Banana cytosol 65.6 51.07
AT2G44680.1 Thale cress cytosol 65.6 50.53
CDX71824 Canola cytosol 60.55 50.19
TraesCS2B01G408900.1 Wheat cytosol 63.76 50.18
Solyc05g050680.2.1 Tomato nucleus 65.6 50.18
Bra022101.1-P Field mustard cytosol 63.3 49.82
AT5G47080.1 Thale cress cytosol 65.14 49.48
CDY28980 Canola cytosol 62.84 49.46
KRH57536 Soybean cytosol 58.26 49.42
Solyc01g088740.2.1 Tomato cytosol 64.68 49.3
AT3G60250.1 Thale cress cytosol 62.39 49.28
KRH04249 Soybean nucleus 59.17 49.24
CDY40582 Canola cytosol 61.93 48.91
PGSC0003DMT400004353 Potato cytosol 65.14 48.8
CDX78786 Canola cytosol 61.93 48.21
Bra040171.1-P Field mustard cytosol 61.93 48.04
GSMUA_Achr8P14950_001 Banana cytosol 62.39 47.89
PGSC0003DMT400068359 Potato cytosol 61.47 47.02
Solyc06g061000.2.1 Tomato cytosol 61.47 46.85
CDY38414 Canola cytosol 61.01 46.83
PGSC0003DMT400018024 Potato mitochondrion 66.06 46.6
AT4G17640.1 Thale cress cytosol 60.09 46.45
VIT_15s0021g01020.t01 Wine grape cytosol 64.68 46.08
CDY09612 Canola cytosol 59.17 45.26
CDX90462 Canola cytosol 58.72 44.91
GSMUA_Achr2P10400_001 Banana cytosol 64.68 43.38
CDX77739 Canola cytosol 48.17 42.17
CDY48948 Canola cytosol 51.38 41.33
CDY64781 Canola cytosol 50.0 40.98
Bra025515.1-P Field mustard cytosol 50.46 40.89
Solyc10g061930.1.1 Tomato nucleus 30.28 39.76
Bra025463.1-P Field mustard cytosol 50.0 38.93
GSMUA_Achr4P17850_001 Banana endoplasmic reticulum, extracellular, plasma membrane 40.37 37.61
Bra012652.1-P Field mustard cytosol 52.75 35.28
GSMUA_Achr4P17860_001 Banana cytosol 27.52 34.09
Protein Annotations
Gene3D:1.10.1820.10MapMan:18.4.3.9.2Gene3D:2.20.25.20InterPro:Casein_kin_II_reg-sub_NInterPro:Casein_kinase_II_beta_likeInterPro:Casein_kinase_II_reg-sub
GO:GO:0003674GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005956GO:GO:0006464
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0019538GO:GO:0019887GO:GO:0030234
InterPro:IPR016149PFAM:PF01214PRINTS:PR00472ScanProsite:PS01101PANTHER:PTHR11740PANTHER:PTHR11740:SF5
SMART:SM01085SUPFAM:SSF57798EnsemblPlantsGene:TraesCS4B01G379300EnsemblPlants:TraesCS4B01G379300.1SEG:seg:
Description
No Description!
Coordinates
chr4B:+:660582267..660583286
Molecular Weight (calculated)
24263.6 Da
IEP (calculated)
4.818
GRAVY (calculated)
-0.423
Length
218 amino acids
Sequence
(BLAST)
001: MDRKRINDAL DRHLRAATER SSPSTSRGAK PKPPPAAAPK PKEQLDSDSS EGGSVGGSSE ADDTFWINWF CAMRGNEFFA EVDDDYIQDD FNLCGLSAQV
101: PYYDHALDLI LDLEPVQGDV FADDQNELIV ASAEMLYGLI HARYILTTKG LAAMLEKFKN CDFGRCPRVS CSGQPCLPMG QSDIPRSSTV KIYCPKCEDL
201: YYPRSKHQAS ILLNFLLR
Best Arabidopsis Sequence Match ( AT2G44680.1 )
(BLAST)
001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ
Arabidopsis Description
CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.