Factsheet for GSMUA_Achr2P10400_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P30080_001	Banana	cytosol	80.31	93.21
GSMUA_Achr4P26360_001	Banana	cytosol	79.69	92.5
GSMUA_AchrUn_...	Banana	cytosol	78.15	90.71
TraesCS2D01G242000.2	Wheat	cytosol	66.46	80.3
GSMUA_Achr8P14950_001	Banana	cytosol	69.85	79.93
Zm00001d021557_P001	Maize	cytosol	67.08	79.85
TraesCS2A01G245100.1	Wheat	cytosol	66.46	79.7
KXG36270	Sorghum	cytosol	67.08	79.27
EER91910	Sorghum	cytosol	62.77	77.86
Os07t0495100-01	Rice	cytosol	67.38	76.04
Zm00001d029978_P001	Maize	cytosol	51.38	75.91
TraesCSU01G007300.1	Wheat	cytosol	64.0	75.64
TraesCS1A01G215700.1	Wheat	cytosol	64.0	75.64
TraesCS1B01G229200.1	Wheat	cytosol	64.0	75.64
HORVU1Hr1G055250.1	Barley	cytosol	63.69	75.27
Os10t0564900-01	Rice	cytosol	64.31	74.91
HORVU2Hr1G092930.1	Barley	cytosol	62.46	73.29
TraesCS2D01G388200.1	Wheat	cytosol	62.46	73.29
TraesCS2A01G390500.1	Wheat	cytosol	62.46	73.29
TraesCS2B01G408900.1	Wheat	cytosol	62.46	73.29
Zm00001d006440_P003	Maize	cytosol	65.85	70.86
OQU82060	Sorghum	cytosol	60.31	70.5
Zm00001d002778_P001	Maize	nucleus	50.46	68.33
TraesCS5A01G545600.3	Wheat	cytosol, mitochondrion	52.31	66.93
TraesCSU01G129600.1	Wheat	cytosol, mitochondrion	52.0	66.8
TraesCS4B01G379300.1	Wheat	cytosol, mitochondrion	43.38	64.68
HORVU4Hr1G090280.3	Barley	cytosol	51.38	61.62
GSMUA_Achr4P17850_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	43.69	60.68
CDY64781	Canola	cytosol	48.62	59.4
Bra025515.1-P	Field mustard	cytosol	48.92	59.11
GSMUA_Achr4P17860_001	Banana	cytosol	32.0	59.09
CDY48948	Canola	cytosol	48.92	58.67
Zm00001d000052_P004	Maize	cytosol	49.54	55.71
GSMUA_Achr6P11870_001	Banana	cytosol, plastid	46.15	51.72
GSMUA_Achr2P21300_001	Banana	cytosol	42.77	49.29
Bra012652.1-P	Field mustard	cytosol	46.15	46.01

Protein Annotations

Gene3D:1.10.1820.10	MapMan:18.4.3.9.2	Gene3D:2.20.25.20	InterPro:Casein_kin_II_reg-sub_N	InterPro:Casein_kinase_II_beta_like	InterPro:Casein_kinase_II_reg-sub
GO:GO:0003674	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005956	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019887	GO:GO:0030234
GO:GO:0045859	EnsemblPlantsGene:GSMUA_Achr2G10400_001	EnsemblPlants:GSMUA_Achr2P10400_001	EnsemblPlants:GSMUA_Achr2T10400_001	InterPro:IPR016149	UniProt:M0S6T1
PFAM:PF01214	PRINTS:PR00472	ScanProsite:PS01101	PANTHER:PTHR11740	PANTHER:PTHR11740:SF15	SMART:SM01085
SUPFAM:SSF57798	UniParc:UPI000294EF55	SEG:seg	:	:	:

Description

Putative casein kinase II subunit beta-4 [Source:GMGC_GENE;Acc:GSMUA_Achr2G10400_001]

Coordinates

chr2:-:13521819..13528308

Molecular Weight (calculated)

37054.5 Da

IEP (calculated)

5.516

GRAVY (calculated)

-0.714

Length

325 amino acids

Sequence
(BLAST)

001: MESIEFANPD RRRGFRLVPL RKGAVNLFRA RFGGDGRVDR REEGDMYRER GGSGLKVEIG AVDRKRINDA LDKHMEKSPP SASRGLNSKE KDRLSVPSTS
101: SGKQPEHRSL SKNKCSDEES ETDSEESDVS GSDMEDTSWI SWFCNLRGNE FFCEVDEEYI QDDFNLCGLS SQVPYYDYAL DLILDVESSN GDMFTEEQNE
201: LVESAAEMLY GLIHVRYILT SRGMAAMLEK FKNYDFGRCP RVYCSGQPCL PVGQSDIPRS STVKIYCPKC EDIYYPRSKY QGNIDGAYFG TTFPHLFLMT
301: YGHLKPQKPS QQYVPRVFGF KVHKP

Best Arabidopsis Sequence Match ( AT2G44680.1 )
(BLAST)

001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ

Arabidopsis Description

CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.