CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025515.1-P	Field mustard	cytosol	92.25	92.94
CDY64781	Canola	cytosol	89.3	90.98
CDX90462	Canola	cytosol	62.73	59.65
CDX78786	Canola	cytosol	61.62	59.64
CDY09612	Canola	cytosol	62.36	59.3
CDY38414	Canola	cytosol	61.25	58.45
TraesCS2D01G242000.2	Wheat	cytosol	57.2	57.62
TraesCS2A01G245100.1	Wheat	cytosol	57.2	57.2
Zm00001d021557_P001	Maize	cytosol	57.56	57.14
KXG36270	Sorghum	cytosol	57.93	57.09
GSMUA_AchrUn_...	Banana	cytosol	58.67	56.79
GSMUA_Achr4P30080_001	Banana	cytosol	58.67	56.79
CDY28980	Canola	cytosol	57.93	56.68
CDY40582	Canola	cytosol	57.56	56.52
EER91910	Sorghum	cytosol	54.61	56.49
CDX74677	Canola	cytosol	54.98	55.81
GSMUA_Achr4P26360_001	Banana	cytosol	57.56	55.71
TraesCS1A01G215700.1	Wheat	cytosol	55.35	54.55
TraesCS1B01G229200.1	Wheat	cytosol	55.35	54.55
HORVU1Hr1G055250.1	Barley	cytosol	55.35	54.55
TraesCSU01G007300.1	Wheat	cytosol	55.35	54.55
Zm00001d029978_P001	Maize	cytosol	44.28	54.55
CDY48249	Canola	cytosol	53.87	54.48
CDY64765	Canola	cytosol	53.51	54.31
Os07t0495100-01	Rice	cytosol	57.56	54.17
CDX71824	Canola	cytosol	52.4	53.99
CDY41181	Canola	cytosol	52.4	53.99
OQU82060	Sorghum	cytosol	55.35	53.96
CDX95610	Canola	cytosol	54.61	53.82
Zm00001d002778_P001	Maize	nucleus	47.6	53.75
GSMUA_Achr8P14950_001	Banana	cytosol	56.09	53.52
CDX83421	Canola	cytosol	54.24	53.45
TraesCS2B01G408900.1	Wheat	cytosol	54.24	53.07
TraesCS2D01G388200.1	Wheat	cytosol	54.24	53.07
TraesCS2A01G390500.1	Wheat	cytosol	54.24	53.07
HORVU2Hr1G092930.1	Barley	cytosol	54.24	53.07
CDX77739	Canola	cytosol	48.71	53.01
Os10t0564900-01	Rice	cytosol	54.24	52.69
TraesCSU01G129600.1	Wheat	cytosol, mitochondrion	47.97	51.38
TraesCS4B01G379300.1	Wheat	cytosol, mitochondrion	41.33	51.38
Zm00001d006440_P003	Maize	cytosol	57.2	51.32
TraesCS5A01G545600.3	Wheat	cytosol, mitochondrion	47.6	50.79
GSMUA_Achr2P10400_001	Banana	cytosol	58.67	48.92
HORVU4Hr1G090280.3	Barley	cytosol	46.49	46.49
Zm00001d000052_P004	Maize	cytosol	42.44	39.79

Protein Annotations

Gene3D:1.10.1820.10	MapMan:18.4.3.9.2	Gene3D:2.20.25.20	GO:A0A078IIL6	UniProt:A0A078IIL6	EnsemblPlants:CDY48948
ProteinID:CDY48948	ProteinID:CDY48948.1	InterPro:Casein_kin_II_reg-sub_N	InterPro:Casein_kinase_II_beta_like	InterPro:Casein_kinase_II_reg-sub	GO:GO:0003674
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005956	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019887	GO:GO:0030234	GO:GO:0045859
EnsemblPlantsGene:GSBRNA2T00092071001	InterPro:IPR016149	PFAM:PF01214	PRINTS:PR00472	ScanProsite:PS01101	PANTHER:PTHR11740
PANTHER:PTHR11740:SF15	SMART:SM01085	SUPFAM:SSF57798	UniParc:UPI0004EECC00	SEG:seg	:

Description

BnaA04g10920DCasein kinase II subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A078IIL6]

Coordinates

chrLK032804:+:17270..18608

Molecular Weight (calculated)

30096.3 Da

IEP (calculated)

4.630

GRAVY (calculated)

-0.360

Length

271 amino acids

Sequence
(BLAST)

001: MFTGGGTVGP KAEVVDREGI SEAYDVNRSE GKETAGANSV LMGTQMHDSR SATLSRTDIF QAVDTSEGSE VSGSDEEDLA WTTWFCKLPG NEFLCEVDDC
101: FILDNFNLCG LRHQVPFYDN ALDLILDDDS SSHGQMITDE QNELIESAAE MLYGLIHARY ILTDKGFLSM LNKYNKSEFG RCPRVYCSGQ SCLPIGLSDV
201: PGASTVKIYC PKCEDIYHPP SKYQGSSNID GSYFGTAFPH LFLMYYPSRR PKKVSSQSYV PRVFGFNLHK P

Best Arabidopsis Sequence Match ( AT2G44680.1 )
(BLAST)

001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ

Arabidopsis Description

CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.