Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83421 | Canola | cytosol | 98.91 | 98.91 |
| AT2G44680.1 | Thale cress | cytosol | 83.64 | 81.27 |
| CDY41181 | Canola | cytosol | 77.09 | 80.61 |
| CDX71824 | Canola | cytosol | 76.36 | 79.85 |
| CDY64765 | Canola | cytosol | 77.45 | 79.78 |
| CDX74677 | Canola | cytosol | 76.36 | 78.65 |
| CDY48249 | Canola | cytosol | 76.36 | 78.36 |
| TraesCS2D01G242000.2 | Wheat | cytosol | 72.36 | 73.98 |
| Solyc05g050680.2.1 | Tomato | nucleus | 76.36 | 73.68 |
| TraesCS2A01G245100.1 | Wheat | cytosol | 72.36 | 73.43 |
| VIT_02s0012g00080.t01 | Wine grape | cytosol | 70.91 | 73.31 |
| Zm00001d021557_P001 | Maize | cytosol | 72.36 | 72.89 |
| Solyc01g088740.2.1 | Tomato | cytosol | 74.91 | 72.03 |
| KXG36270 | Sorghum | cytosol | 72.0 | 72.0 |
| EER91910 | Sorghum | cytosol | 68.36 | 71.76 |
| PGSC0003DMT400004353 | Potato | cytosol | 75.64 | 71.48 |
| Zm00001d029978_P001 | Maize | cytosol | 57.09 | 71.36 |
| Os07t0495100-01 | Rice | cytosol | 74.18 | 70.83 |
| HORVU1Hr1G055250.1 | Barley | cytosol | 70.18 | 70.18 |
| TraesCSU01G007300.1 | Wheat | cytosol | 70.18 | 70.18 |
| TraesCS1B01G229200.1 | Wheat | cytosol | 70.18 | 70.18 |
| TraesCS1A01G215700.1 | Wheat | cytosol | 70.18 | 70.18 |
| CDX78786 | Canola | cytosol | 70.55 | 69.29 |
| Os10t0564900-01 | Rice | cytosol | 70.18 | 69.18 |
| CDY28980 | Canola | cytosol | 68.0 | 67.51 |
| TraesCS2D01G388200.1 | Wheat | cytosol | 68.0 | 67.51 |
| TraesCS2B01G408900.1 | Wheat | cytosol | 68.0 | 67.51 |
| TraesCS2A01G390500.1 | Wheat | cytosol | 68.0 | 67.51 |
| HORVU2Hr1G092930.1 | Barley | cytosol | 68.0 | 67.51 |
| CDY40582 | Canola | cytosol | 67.64 | 67.39 |
| CDY38414 | Canola | cytosol | 69.45 | 67.25 |
| TraesCSU01G129600.1 | Wheat | cytosol, mitochondrion | 61.45 | 66.8 |
| TraesCS5A01G545600.3 | Wheat | cytosol, mitochondrion | 61.45 | 66.54 |
| CDY09612 | Canola | cytosol | 68.73 | 66.32 |
| CDX90462 | Canola | cytosol | 68.73 | 66.32 |
| TraesCS4B01G379300.1 | Wheat | cytosol, mitochondrion | 51.64 | 65.14 |
| Zm00001d006440_P003 | Maize | cytosol | 71.27 | 64.9 |
| OQU82060 | Sorghum | cytosol | 64.36 | 63.67 |
| CDX77739 | Canola | cytosol | 56.73 | 62.65 |
| HORVU4Hr1G090280.3 | Barley | cytosol | 61.45 | 62.36 |
| Zm00001d002778_P001 | Maize | nucleus | 54.18 | 62.08 |
| PGSC0003DMT400018024 | Potato | mitochondrion | 65.09 | 57.93 |
| GSMUA_Achr4P17850_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 48.0 | 56.41 |
| CDY64781 | Canola | cytosol | 53.45 | 55.26 |
| CDY48948 | Canola | cytosol | 53.82 | 54.61 |
| Zm00001d000052_P004 | Maize | cytosol | 53.45 | 50.87 |
Protein Annotations
| Gene3D:1.10.1820.10 | MapMan:18.4.3.9.2 | Gene3D:2.20.25.20 | GO:A0A078E1L1 | EnsemblPlants:CDX95610 | ProteinID:CDX95610 |
| ProteinID:CDX95610.1 | InterPro:Casein_kin_II_reg-sub_N | InterPro:Casein_kinase_II_beta_like | InterPro:Casein_kinase_II_reg-sub | GO:GO:0003674 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005956 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019887 | GO:GO:0030234 | EnsemblPlantsGene:GSBRNA2T00101481001 | InterPro:IPR016149 |
| PFAM:PF01214 | PRINTS:PR00472 | ScanProsite:PS01101 | PANTHER:PTHR11740 | PANTHER:PTHR11740:SF15 | SMART:SM01085 |
| SUPFAM:SSF57798 | UniParc:UPI0004EE3FDF | SEG:seg | : | : | : |
Description
BnaC03g24910D
Coordinates
chrLK031890:-:223349..224961
Molecular Weight (calculated)
30740.9 Da
IEP (calculated)
4.671
GRAVY (calculated)
-0.572
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKDLSGGIM GSGGSSRSDL LTGAIDRKRI NEALDKHLKK TSPSTSKGKD SNPSTSTAKS HLPDQSETDS EEEGSEVSGS EGDDDTSWIS WFCSLRGNEF
101: FCEVDEDYVQ DDFNLCGLSG QVPYYDYALD LILDVESSNS DMFTEEQNEL VESAAEMLYG LIHVRYILTT KGMAAMLEKY KNYDFGRCPR VFCCGQPCLP
201: VGQSDIPRSS TVKIYCPKCE DVYYPRSKYQ GNIDGAYFGT TFPHLFLMAY GNLKPQKPTQ SYVPKIFGFK VHNKQ
101: FCEVDEDYVQ DDFNLCGLSG QVPYYDYALD LILDVESSNS DMFTEEQNEL VESAAEMLYG LIHVRYILTT KGMAAMLEKY KNYDFGRCPR VFCCGQPCLP
201: VGQSDIPRSS TVKIYCPKCE DVYYPRSKYQ GNIDGAYFGT TFPHLFLMAY GNLKPQKPTQ SYVPKIFGFK VHNKQ
001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ
Arabidopsis Description
CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.