CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES13385

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G60250.1	EES13385	AT2G46830.1	10535927
AT3G60250.1	EES13385	AT2G46830.1	14978263
AT3G60250.1	EES13385	AT2G46830.1	9724822
AT4G17640.1	EES13385	AT2G46830.1	9724822
AT5G47080.1	EES13385	AT2G46830.1	9724822

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021557_P001	Maize	cytosol	97.09	97.8
TraesCS2D01G242000.2	Wheat	cytosol	90.91	92.94
TraesCS2A01G245100.1	Wheat	cytosol	90.55	91.88
Solyc10g061940.1.1	Tomato	mitochondrion	38.18	89.74
Os07t0495100-01	Rice	cytosol	93.45	89.24
Zm00001d006440_P003	Maize	cytosol	96.73	88.08
KRH57540	Soybean	nucleus	76.36	80.46
GSMUA_Achr4P30080_001	Banana	cytosol	81.45	80.0
GSMUA_Achr4P26360_001	Banana	cytosol	81.09	79.64
GSMUA_AchrUn_...	Banana	cytosol	80.36	78.93
VIT_02s0012g00080.t01	Wine grape	cytosol	75.64	78.2
KRH04253	Soybean	nucleus	74.91	78.03
EER91910	Sorghum	cytosol	74.18	77.86
KRH28210	Soybean	nucleus	78.55	75.52
KRH77278	Soybean	nucleus	78.18	75.44
Solyc05g050680.2.1	Tomato	nucleus	77.82	75.09
PGSC0003DMT400004353	Potato	cytosol	79.27	74.91
Bra003407.1-P	Field mustard	cytosol	72.73	74.91
Solyc01g088740.2.1	Tomato	cytosol	77.82	74.83
CDY64765	Canola	cytosol	72.0	74.16
Bra007520.1-P	Field mustard	cytosol	70.91	74.14
CDY41181	Canola	cytosol	70.91	74.14
CDX71824	Canola	cytosol	70.18	73.38
PGSC0003DMT400068359	Potato	cytosol	75.64	72.98
GSMUA_Achr8P14950_001	Banana	cytosol	75.27	72.89
Solyc06g061000.2.1	Tomato	cytosol	75.64	72.73
Bra000359.1-P	Field mustard	cytosol	72.73	72.73
Bra004856.1-P	Field mustard	cytosol	69.09	72.52
CDX83421	Canola	cytosol	72.36	72.36
CDX95610	Canola	cytosol	72.0	72.0
CDX74677	Canola	cytosol	69.82	71.91
AT2G44680.1	Thale cress	cytosol	73.45	71.38
KRH57536	Soybean	cytosol	66.55	71.21
KRH04249	Soybean	nucleus	67.64	70.99
CDY48249	Canola	cytosol	69.09	70.9
AT3G60250.1	Thale cress	cytosol	70.18	69.93
CDX78786	Canola	cytosol	70.91	69.64
Bra040171.1-P	Field mustard	cytosol	70.55	69.04
OQU82060	Sorghum	cytosol	69.45	68.7
Bra022101.1-P	Field mustard	cytosol	68.73	68.23
AT5G47080.1	Thale cress	cytosol	70.91	67.94
CDY28980	Canola	cytosol	68.36	67.87
CDY38414	Canola	cytosol	69.82	67.61
CDY40582	Canola	cytosol	67.64	67.39
GSMUA_Achr2P10400_001	Banana	cytosol	79.27	67.08
AT4G17640.1	Thale cress	cytosol	68.0	66.31
CDX90462	Canola	cytosol	67.64	65.26
CDY09612	Canola	cytosol	67.64	65.26
CDX77739	Canola	cytosol	57.09	63.05
VIT_15s0021g01020.t01	Wine grape	cytosol	68.73	61.76
GSMUA_Achr4P17850_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	51.27	60.26
PGSC0003DMT400018024	Potato	mitochondrion	66.91	59.55
CDY64781	Canola	cytosol	56.73	58.65
Bra025515.1-P	Field mustard	cytosol	57.09	58.36
CDY48948	Canola	cytosol	57.09	57.93
Bra025463.1-P	Field mustard	cytosol	56.73	55.71
Solyc10g061930.1.1	Tomato	nucleus	32.36	53.61
GSMUA_Achr4P17860_001	Banana	cytosol	31.64	49.43
Bra012652.1-P	Field mustard	cytosol	53.82	45.4

Protein Annotations

Gene3D:1.10.1820.10	MapMan:18.4.3.9.2	Gene3D:2.20.25.20	UniProt:A0A1B6QEC8	InterPro:Casein_kin_II_reg-sub_N	InterPro:Casein_kinase_II_beta_like
InterPro:Casein_kinase_II_reg-sub	GO:GO:0003674	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005956
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019887
GO:GO:0030234	GO:GO:0045859	InterPro:IPR016149	EnsemblPlants:KXG36270	ProteinID:KXG36270	ProteinID:KXG36270.1
PFAM:PF01214	PRINTS:PR00472	ScanProsite:PS01101	PANTHER:PTHR11740	PANTHER:PTHR11740:SF15	SMART:SM01085
EnsemblPlantsGene:SORBI_3002G309800	SUPFAM:SSF57798	UniParc:UPI0001FCC795	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:68396834..68400355

Molecular Weight (calculated)

30587.7 Da

IEP (calculated)

5.554

GRAVY (calculated)

-0.511

Length

275 amino acids

Sequence
(BLAST)

001: MYKQGGAGGG AGLDRKRISD ALDKHLEKAV ASPSTSRGSA GGGGGRDHHR LVVPSSVSTI LKGHCSEGES DSDSEASDVS GSDGEDTSWI SWYCNLRGNE
101: FFCEVDDDYI QDDFNLCGLS SQVPYYDYAL DLILDIESSH GDMFTEEQNE LVESAAEMLY GLIHARYILT SKGLAAMLEK YKNYDFGRCP RVYCCGQPCL
201: PVGQSDIHRS STVKIYCPKC EDIYYPRSKY QGNIDGAYFG TTFPHLFLMT YEHLKPQKPS QRYVPRVFGF KLHKP

Best Arabidopsis Sequence Match ( AT2G44680.1 )
(BLAST)

001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ

Arabidopsis Description

CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.