Factsheet for Bra004856.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74677	Canola	cytosol	94.27	92.51
CDY48249	Canola	cytosol	91.98	89.93
AT2G44680.1	Thale cress	cytosol	85.5	79.15
Bra007520.1-P	Field mustard	cytosol	79.39	79.09
Bra003407.1-P	Field mustard	cytosol	79.39	77.9
Bra000359.1-P	Field mustard	cytosol	81.68	77.82
Solyc01g088740.2.1	Tomato	cytosol	77.1	70.63
Zm00001d021557_P001	Maize	cytosol	72.52	69.6
VIT_02s0012g00080.t01	Wine grape	cytosol	70.61	69.55
TraesCS2D01G242000.2	Wheat	cytosol	71.37	69.52
KXG36270	Sorghum	cytosol	72.52	69.09
PGSC0003DMT400004353	Potato	cytosol	76.72	69.07
TraesCS2A01G245100.1	Wheat	cytosol	71.37	69.0
EER91910	Sorghum	cytosol	67.94	67.94
Zm00001d029978_P001	Maize	cytosol	56.11	66.82
Os10t0564900-01	Rice	cytosol	70.23	65.95
Os07t0495100-01	Rice	cytosol	72.14	65.62
TraesCSU01G007300.1	Wheat	cytosol	68.7	65.45
HORVU1Hr1G055250.1	Barley	cytosol	68.7	65.45
TraesCS1A01G215700.1	Wheat	cytosol	68.7	65.45
TraesCS1B01G229200.1	Wheat	cytosol	68.7	65.45
Solyc05g050680.2.1	Tomato	nucleus	70.61	64.91
HORVU2Hr1G092930.1	Barley	cytosol	67.94	64.26
TraesCS2D01G388200.1	Wheat	cytosol	67.94	64.26
TraesCS2B01G408900.1	Wheat	cytosol	67.94	64.26
TraesCS2A01G390500.1	Wheat	cytosol	67.94	64.26
Bra040171.1-P	Field mustard	cytosol	68.7	64.06
TraesCSU01G129600.1	Wheat	cytosol, mitochondrion	61.83	64.03
TraesCS5A01G545600.3	Wheat	cytosol, mitochondrion	61.83	63.78
Bra022101.1-P	Field mustard	cytosol	65.27	61.73
Zm00001d006440_P003	Maize	cytosol	70.99	61.59
TraesCS4B01G379300.1	Wheat	cytosol, mitochondrion	51.15	61.47
OQU82060	Sorghum	cytosol	64.12	60.43
HORVU4Hr1G090280.3	Barley	cytosol	61.83	59.78
Zm00001d002778_P001	Maize	nucleus	53.44	58.33
PGSC0003DMT400018024	Potato	mitochondrion	65.65	55.66
Bra025515.1-P	Field mustard	cytosol	56.49	55.02
GSMUA_Achr4P17850_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	47.33	52.99
Bra025463.1-P	Field mustard	cytosol	54.96	51.43
Zm00001d000052_P004	Maize	cytosol	54.96	49.83
Bra012652.1-P	Field mustard	cytosol	50.76	40.8

Protein Annotations

Gene3D:1.10.1820.10	MapMan:18.4.3.9.2	Gene3D:2.20.25.20	EnsemblPlantsGene:Bra004856	EnsemblPlants:Bra004856.1	EnsemblPlants:Bra004856.1-P
InterPro:Casein_kin_II_reg-sub_N	InterPro:Casein_kinase_II_beta_like	InterPro:Casein_kinase_II_reg-sub	GO:GO:0003674	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005956	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0019538	GO:GO:0019887	GO:GO:0030234	GO:GO:0045859	InterPro:IPR016149	UniProt:M4CKX0
PFAM:PF01214	PRINTS:PR00472	ScanProsite:PS01101	PANTHER:PTHR11740	PANTHER:PTHR11740:SF15	SMART:SM01085
SUPFAM:SSF57798	UniParc:UPI0002547E25	SEG:seg	:	:	:

Description

AT2G44680 (E=6e-098) CKB4 | CKB4 (CASEIN KINASE II BETA SUBUNIT 4); protein serine/threonine kinase

Coordinates

chrA05:-:2149090..2150324

Molecular Weight (calculated)

29236.4 Da

IEP (calculated)

5.189

GRAVY (calculated)

-0.502

Length

262 amino acids

Sequence
(BLAST)

001: MHKGRSGITM GGGGSSSRSE LLGGATDRKR INEALDKHLK KSLDKDSFPS TSTNKVESEG SDVSGSEGED EDTSWISWFC NLRGNEFFCE VDEDYVQDDF
101: NLCGLSGLVP YYDYALDLIL DIDSSNGDMF TEEQNELVES AAEMLYGLIH VRYILTTKGM AAMLEKYKSC DFGRCPRVFC SGQSCLPVGQ SDIPRSSTVK
201: IYCPKCEDLY YPRSKYQGNI DGAYFGTTFP HLFLMAHGNV KPQKPSQSYV PKIFGFKVHK KQ

Best Arabidopsis Sequence Match ( AT2G44680.1 )
(BLAST)

001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ

Arabidopsis Description

CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.