Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d024546_P001 | |
| Zm00001d049543_P003 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36270 | Sorghum | cytosol | 88.08 | 96.73 |
| Zm00001d021557_P001 | Maize | cytosol | 87.42 | 96.7 |
| TraesCS2D01G242000.2 | Wheat | cytosol | 82.12 | 92.19 |
| TraesCS2A01G245100.1 | Wheat | cytosol | 81.79 | 91.14 |
| Solyc10g061940.1.1 | Tomato | mitochondrion | 34.44 | 88.89 |
| Os07t0495100-01 | Rice | cytosol | 84.11 | 88.19 |
| KRH57540 | Soybean | nucleus | 68.87 | 79.69 |
| GSMUA_Achr4P30080_001 | Banana | cytosol | 72.52 | 78.21 |
| GSMUA_Achr4P26360_001 | Banana | cytosol | 72.19 | 77.86 |
| KRH04253 | Soybean | nucleus | 67.88 | 77.65 |
| GSMUA_AchrUn_... | Banana | cytosol | 71.52 | 77.14 |
| VIT_02s0012g00080.t01 | Wine grape | cytosol | 67.88 | 77.07 |
| Zm00001d029978_P001 | Maize | cytosol | 55.63 | 76.36 |
| PGSC0003DMT400004353 | Potato | cytosol | 71.19 | 73.88 |
| Bra003407.1-P | Field mustard | cytosol | 65.23 | 73.78 |
| KRH28210 | Soybean | nucleus | 69.87 | 73.78 |
| Solyc01g088740.2.1 | Tomato | cytosol | 69.87 | 73.78 |
| Solyc05g050680.2.1 | Tomato | nucleus | 69.54 | 73.68 |
| KRH77278 | Soybean | nucleus | 69.54 | 73.68 |
| CDY64765 | Canola | cytosol | 64.57 | 73.03 |
| Bra007520.1-P | Field mustard | cytosol | 63.58 | 73.0 |
| CDY41181 | Canola | cytosol | 63.58 | 73.0 |
| Bra000359.1-P | Field mustard | cytosol | 65.56 | 72.0 |
| PGSC0003DMT400068359 | Potato | cytosol | 67.88 | 71.93 |
| CDX71824 | Canola | cytosol | 62.58 | 71.86 |
| Solyc06g061000.2.1 | Tomato | cytosol | 67.88 | 71.68 |
| CDX83421 | Canola | cytosol | 65.23 | 71.64 |
| GSMUA_Achr8P14950_001 | Banana | cytosol | 67.22 | 71.48 |
| CDX95610 | Canola | cytosol | 64.9 | 71.27 |
| Bra004856.1-P | Field mustard | cytosol | 61.59 | 70.99 |
| CDX74677 | Canola | cytosol | 62.58 | 70.79 |
| AT2G44680.1 | Thale cress | cytosol | 65.89 | 70.32 |
| CDY48249 | Canola | cytosol | 61.92 | 69.78 |
| KRH57536 | Soybean | cytosol | 59.27 | 69.65 |
| KRH04249 | Soybean | nucleus | 60.26 | 69.47 |
| Bra040171.1-P | Field mustard | cytosol | 64.57 | 69.39 |
| AT3G60250.1 | Thale cress | cytosol | 63.24 | 69.2 |
| CDX78786 | Canola | cytosol | 63.91 | 68.93 |
| Bra022101.1-P | Field mustard | cytosol | 61.26 | 66.79 |
| AT5G47080.1 | Thale cress | cytosol | 63.24 | 66.55 |
| CDY28980 | Canola | cytosol | 60.93 | 66.43 |
| Zm00001d002778_P001 | Maize | nucleus | 52.65 | 66.25 |
| CDY38414 | Canola | cytosol | 62.25 | 66.2 |
| CDY40582 | Canola | cytosol | 60.26 | 65.94 |
| GSMUA_Achr2P10400_001 | Banana | cytosol | 70.86 | 65.85 |
| AT4G17640.1 | Thale cress | cytosol | 60.6 | 64.89 |
| CDY09612 | Canola | cytosol | 60.26 | 63.86 |
| CDX90462 | Canola | cytosol | 60.26 | 63.86 |
| CDX77739 | Canola | cytosol | 50.66 | 61.45 |
| VIT_15s0021g01020.t01 | Wine grape | cytosol | 62.25 | 61.44 |
| GSMUA_Achr4P17850_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 46.36 | 59.83 |
| PGSC0003DMT400018024 | Potato | mitochondrion | 60.93 | 59.55 |
| Bra025515.1-P | Field mustard | cytosol | 51.66 | 57.99 |
| CDY64781 | Canola | cytosol | 50.99 | 57.89 |
| CDY48948 | Canola | cytosol | 51.32 | 57.2 |
| Zm00001d000052_P004 | Maize | cytosol | 52.98 | 55.36 |
| Bra025463.1-P | Field mustard | cytosol | 50.33 | 54.29 |
| Solyc10g061930.1.1 | Tomato | nucleus | 29.14 | 53.01 |
| GSMUA_Achr4P17860_001 | Banana | cytosol | 28.81 | 49.43 |
| Bra012652.1-P | Field mustard | cytosol | 48.68 | 45.09 |
Protein Annotations
| Gene3D:1.10.1820.10 | MapMan:18.4.3.9.2 | Gene3D:2.20.25.20 | UniProt:A0A1D6EWI5 | InterPro:Casein_kin_II_reg-sub_N | InterPro:Casein_kinase_II_beta_like |
| InterPro:Casein_kinase_II_reg-sub | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005956 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0019887 | GO:GO:0030234 | GO:GO:0045859 |
| InterPro:IPR016149 | ProteinID:ONM23873.1 | ProteinID:ONM23874.1 | PFAM:PF01214 | PRINTS:PR00472 | ScanProsite:PS01101 |
| PANTHER:PTHR11740 | PANTHER:PTHR11740:SF15 | SMART:SM01085 | SUPFAM:SSF57798 | UniParc:UPI000844E09F | EnsemblPlantsGene:Zm00001d006440 |
| EnsemblPlants:Zm00001d006440_P003 | EnsemblPlants:Zm00001d006440_T003 | SEG:seg | : | : | : |
Description
Casein kinase II subunit beta-1
Coordinates
chr2:-:208245629..208249764
Molecular Weight (calculated)
33948.0 Da
IEP (calculated)
5.368
GRAVY (calculated)
-0.339
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKQGGAGVG AGLDRKRISD ALDKHLEKAV ASPSTSRGSA GGGGVRDHHR LVVPSSVSSI PKGRCSEGES DSDSEASDVS GSDGEDTSWI SWYCNLRGNE
101: FFCEVDDDYI QDDFNLCGLS SQVPYYDYAL DLILDIESSH GDMFTEEQNE LVESAAEMLY GLIHARYILT SKGLAAMLEK YRNYDFGRCP RVYCCGQPCL
201: PVGQSDIHRS STVKIYCPKC EDIYYPRSKY QGSILTILLL YYLYACVSNF DLFVRTQTYD IDGAYFGTTF PHLFLMTYEH LKLQKPLQRY VPRVFGFKLH
301: KP
101: FFCEVDDDYI QDDFNLCGLS SQVPYYDYAL DLILDIESSH GDMFTEEQNE LVESAAEMLY GLIHARYILT SKGLAAMLEK YRNYDFGRCP RVYCCGQPCL
201: PVGQSDIHRS STVKIYCPKC EDIYYPRSKY QGSILTILLL YYLYACVSNF DLFVRTQTYD IDGAYFGTTF PHLFLMTYEH LKLQKPLQRY VPRVFGFKLH
301: KP
001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ
Arabidopsis Description
CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.