Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90462 | Canola | cytosol | 90.43 | 89.47 |
| CDY09612 | Canola | cytosol | 89.72 | 88.77 |
| AT5G47080.1 | Thale cress | cytosol | 78.72 | 77.35 |
| TraesCS2B01G408900.1 | Wheat | cytosol | 69.15 | 70.4 |
| TraesCS2A01G390500.1 | Wheat | cytosol | 69.15 | 70.4 |
| HORVU2Hr1G092930.1 | Barley | cytosol | 69.15 | 70.4 |
| TraesCS2D01G388200.1 | Wheat | cytosol | 69.15 | 70.4 |
| TraesCS2D01G242000.2 | Wheat | cytosol | 67.02 | 70.26 |
| TraesCS2A01G245100.1 | Wheat | cytosol | 67.02 | 69.74 |
| Zm00001d021557_P001 | Maize | cytosol | 66.67 | 68.86 |
| KXG36270 | Sorghum | cytosol | 66.31 | 68.0 |
| Zm00001d029978_P001 | Maize | cytosol | 52.48 | 67.27 |
| OQU82060 | Sorghum | cytosol | 65.96 | 66.91 |
| EER91910 | Sorghum | cytosol | 62.06 | 66.79 |
| Zm00001d002778_P001 | Maize | nucleus | 56.03 | 65.83 |
| AT2G44680.1 | Thale cress | cytosol | 65.6 | 65.37 |
| Os10t0564900-01 | Rice | cytosol | 64.54 | 65.23 |
| TraesCSU01G007300.1 | Wheat | cytosol | 63.48 | 65.09 |
| TraesCS1B01G229200.1 | Wheat | cytosol | 63.48 | 65.09 |
| TraesCS1A01G215700.1 | Wheat | cytosol | 63.48 | 65.09 |
| HORVU1Hr1G055250.1 | Barley | cytosol | 63.48 | 65.09 |
| Os07t0495100-01 | Rice | cytosol | 65.96 | 64.58 |
| AT3G60250.1 | Thale cress | cytosol | 63.12 | 64.49 |
| Zm00001d006440_P003 | Maize | cytosol | 64.89 | 60.6 |
| TraesCS4B01G379300.1 | Wheat | cytosol, mitochondrion | 46.45 | 60.09 |
| Bra025463.1-P | Field mustard | cytosol | 59.57 | 60.0 |
| TraesCSU01G129600.1 | Wheat | cytosol, mitochondrion | 52.84 | 58.89 |
| TraesCS5A01G545600.3 | Wheat | cytosol, mitochondrion | 52.48 | 58.27 |
| HORVU4Hr1G090280.3 | Barley | cytosol | 51.42 | 53.51 |
| Zm00001d000052_P004 | Maize | cytosol | 50.35 | 49.13 |
Protein Annotations
| Gene3D:1.10.1820.10 | MapMan:18.4.3.9.2 | Gene3D:2.20.25.20 | EntrezGene:827484 | UniProt:A0A178UV49 | ProteinID:AEE83927.1 |
| EMBL:AK119067 | ArrayExpress:AT4G17640 | EnsemblPlantsGene:AT4G17640 | RefSeq:AT4G17640 | TAIR:AT4G17640 | RefSeq:AT4G17640-TAIR-G |
| EnsemblPlants:AT4G17640.1 | TAIR:AT4G17640.1 | EMBL:AY085899 | Unigene:At.21221 | EMBL:BT005279 | ProteinID:CAB10544.1 |
| ProteinID:CAB78767.1 | Symbol:CKB2 | InterPro:Casein_kin_II_reg-sub_N | InterPro:Casein_kinase_II_beta_like | InterPro:Casein_kinase_II_reg-sub | GO:GO:0003674 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005956 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0019887 | GO:GO:0030234 | GO:GO:0045859 | InterPro:IPR016149 | RefSeq:NP_193499.1 | ProteinID:OAO97799.1 |
| UniProt:P40229 | PFAM:PF01214 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00472 | ScanProsite:PS01101 | PANTHER:PTHR11740 | PANTHER:PTHR11740:SF15 | SMART:SM01085 | SUPFAM:SSF57798 |
| EMBL:U03984 | UniParc:UPI0000001404 | SEG:seg | : | : | : |
Description
CKB2Casein kinase II subunit beta-2 [Source:UniProtKB/Swiss-Prot;Acc:P40229]
Coordinates
chr4:+:9825145..9827336
Molecular Weight (calculated)
31979.5 Da
IEP (calculated)
5.375
GRAVY (calculated)
-0.589
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRERGMVGS KSEVVDRKRI NEIHDNRPSH SMSQPVNGKG KVTSTSVLMG KQQLHDKESS RSGSISKTNI SDAVDISDTD SEESEVSGSD GEDTSWISWF
101: CNLRGNEFFC EVDDDYIQDD FNLCGLSHQV PYYDYALDLI LDVESSHGEM FTEEQNELIE SAAEMLYGMI HARFILTSKG LASMLDKYKN YDFGRCPRVY
201: CCGQPCLPVG QSDIPRASTV KIYCPKCEDV YYPRSKYQGN IDGAYFGTTF PHLFLMTYGH LKPQKASQSY TQRVFGFKLH KP
101: CNLRGNEFFC EVDDDYIQDD FNLCGLSHQV PYYDYALDLI LDVESSHGEM FTEEQNELIE SAAEMLYGMI HARFILTSKG LASMLDKYKN YDFGRCPRVY
201: CCGQPCLPVG QSDIPRASTV KIYCPKCEDV YYPRSKYQGN IDGAYFGTTF PHLFLMTYGH LKPQKASQSY TQRVFGFKLH KP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.