Factsheet for HORVU4Hr1G090280.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G070870.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G60250.1	HORVU7Hr1G070870.2	AT2G46830.1	10535927
AT3G60250.1	HORVU7Hr1G070870.2	AT2G46830.1	14978263
AT3G60250.1	HORVU7Hr1G070870.2	AT2G46830.1	9724822
AT4G17640.1	HORVU7Hr1G070870.2	AT2G46830.1	9724822
AT5G47080.1	HORVU7Hr1G070870.2	AT2G46830.1	9724822

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G129600.1	Wheat	cytosol, mitochondrion	89.67	96.05
TraesCS5A01G545600.3	Wheat	cytosol, mitochondrion	88.93	94.88
TraesCS4B01G379300.1	Wheat	cytosol, mitochondrion	73.8	91.74
Solyc10g061940.1.1	Tomato	mitochondrion	32.84	76.07
KRH57540	Soybean	nucleus	62.73	65.13
KRH04253	Soybean	nucleus	61.25	62.88
CDY64765	Canola	cytosol	61.62	62.55
Bra003407.1-P	Field mustard	cytosol	61.25	62.17
Bra007520.1-P	Field mustard	cytosol	60.15	61.98
CDY41181	Canola	cytosol	60.15	61.98
Bra004856.1-P	Field mustard	cytosol	59.78	61.83
Bra000359.1-P	Field mustard	cytosol	62.36	61.45
CDX83421	Canola	cytosol	62.36	61.45
CDX95610	Canola	cytosol	62.36	61.45
CDX74677	Canola	cytosol	60.52	61.42
VIT_02s0012g00080.t01	Wine grape	cytosol	60.15	61.28
CDY48249	Canola	cytosol	60.52	61.19
HORVU1Hr1G055250.1	Barley	cytosol	61.99	61.09
GSMUA_AchrUn_...	Banana	cytosol	63.1	61.07
CDX71824	Canola	cytosol	59.04	60.84
GSMUA_Achr4P26360_001	Banana	cytosol	61.99	60.0
AT3G60250.1	Thale cress	cytosol	60.52	59.42
AT2G44680.1	Thale cress	cytosol	61.99	59.36
KRH77278	Soybean	nucleus	62.36	59.3
KRH28210	Soybean	nucleus	62.36	59.09
Solyc05g050680.2.1	Tomato	nucleus	61.99	58.95
GSMUA_Achr4P30080_001	Banana	cytosol	60.89	58.93
KRH57536	Soybean	cytosol	55.35	58.37
KRH04249	Soybean	nucleus	56.09	58.02
HORVU2Hr1G092930.1	Barley	cytosol	58.67	57.4
Solyc01g088740.2.1	Tomato	cytosol	60.52	57.34
PGSC0003DMT400004353	Potato	cytosol	60.89	56.7
Bra022101.1-P	Field mustard	cytosol	57.93	56.68
CDX78786	Canola	cytosol	58.3	56.43
GSMUA_Achr8P14950_001	Banana	cytosol	59.04	56.34
CDY28980	Canola	cytosol	57.56	56.32
PGSC0003DMT400068359	Potato	cytosol	59.04	56.14
Solyc06g061000.2.1	Tomato	cytosol	59.04	55.94
Bra040171.1-P	Field mustard	cytosol	57.93	55.87
AT5G47080.1	Thale cress	cytosol	59.04	55.75
CDY40582	Canola	cytosol	56.46	55.43
CDY38414	Canola	cytosol	57.93	55.28
AT4G17640.1	Thale cress	cytosol	53.51	51.42
GSMUA_Achr2P10400_001	Banana	cytosol	61.62	51.38
CDY09612	Canola	cytosol	53.87	51.23
CDX90462	Canola	cytosol	53.14	50.53
CDX77739	Canola	cytosol	45.39	49.4
CDY64781	Canola	cytosol	46.49	47.37
PGSC0003DMT400018024	Potato	mitochondrion	53.87	47.25
GSMUA_Achr4P17850_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	40.59	47.01
VIT_15s0021g01020.t01	Wine grape	cytosol	52.77	46.73
CDY48948	Canola	cytosol	46.49	46.49
Bra025515.1-P	Field mustard	cytosol	45.76	46.1
Bra025463.1-P	Field mustard	cytosol	47.23	45.71
Solyc10g061930.1.1	Tomato	nucleus	23.62	38.55
GSMUA_Achr4P17860_001	Banana	cytosol	23.62	36.36
Bra012652.1-P	Field mustard	cytosol	41.7	34.66

Protein Annotations

Gene3D:1.10.1820.10	MapMan:18.4.3.9.2	Gene3D:2.20.25.20	UniProt:A0A287Q4C7	InterPro:Casein_kin_II_reg-sub_N	InterPro:Casein_kinase_II_beta_like
InterPro:Casein_kinase_II_reg-sub	GO:GO:0003674	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005956
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019887
GO:GO:0030234	GO:GO:0045859	EnsemblPlantsGene:HORVU4Hr1G090280	EnsemblPlants:HORVU4Hr1G090280.3	InterPro:IPR016149	PFAM:PF01214
PRINTS:PR00472	ScanProsite:PS01101	PANTHER:PTHR11740	PANTHER:PTHR11740:SF5	SMART:SM01085	SUPFAM:SSF57798
UniParc:UPI000B487E87	SEG:seg	:	:	:	:

Description

Casein kinase II subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A287Q4C7]

Coordinates

chrchr4H:+:644838199..644840240

Molecular Weight (calculated)

30352.8 Da

IEP (calculated)

7.051

GRAVY (calculated)

-0.638

Length

271 amino acids

Sequence
(BLAST)

001: SCSPTPPPRR PRRRPPAMDR KRINDALDRH LRTAAERPSP STSRGAKPKP PSAAAPKPKE QLDSDSSDEG GSAGGSSEAD DTFWINWFCA MRGNEFFAEV
101: DDDYIQDDFN LCGLSAQVPY YDHALDLILD LEPVQEDVFA DDQNELVVAS AEMLYGLIHA RYILTTKGLA AMLEKFKNCD FGRCPRVSCS GQPCLPMGQS
201: DIARTSTVKI YCPKCEDLYY PRSKHQANTD GAYFGTTFPH MFMMTHSQLK PQKPAQQYVP RIFGFKVQKK T

Best Arabidopsis Sequence Match ( AT2G44680.1 )
(BLAST)

001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ

Arabidopsis Description

CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.