Factsheet for GSMUA_Achr4P30080_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P26360_001	Banana	cytosol	90.36	90.36
GSMUA_AchrUn_...	Banana	cytosol	89.64	89.64
TraesCS2D01G242000.2	Wheat	cytosol	79.29	82.53
TraesCS2A01G245100.1	Wheat	cytosol	79.29	81.92
Zm00001d021557_P001	Maize	cytosol	79.64	81.69
KXG36270	Sorghum	cytosol	80.0	81.45
GSMUA_Achr2P10400_001	Banana	cytosol	93.21	80.31
GSMUA_Achr8P14950_001	Banana	cytosol	80.36	79.23
EER91910	Sorghum	cytosol	72.5	77.48
Os07t0495100-01	Rice	cytosol	79.64	77.43
Zm00001d029978_P001	Maize	cytosol	60.0	76.36
TraesCSU01G007300.1	Wheat	cytosol	74.64	76.0
TraesCS1A01G215700.1	Wheat	cytosol	74.64	76.0
TraesCS1B01G229200.1	Wheat	cytosol	74.64	76.0
Os10t0564900-01	Rice	cytosol	75.71	75.99
HORVU1Hr1G055250.1	Barley	cytosol	74.29	75.64
TraesCS2D01G388200.1	Wheat	cytosol	71.79	72.56
HORVU2Hr1G092930.1	Barley	cytosol	71.79	72.56
TraesCS2B01G408900.1	Wheat	cytosol	71.79	72.56
TraesCS2A01G390500.1	Wheat	cytosol	71.79	72.56
Zm00001d006440_P003	Maize	cytosol	78.21	72.52
OQU82060	Sorghum	cytosol	70.0	70.5
Zm00001d002778_P001	Maize	nucleus	58.93	68.75
TraesCSU01G129600.1	Wheat	cytosol, mitochondrion	60.0	66.4
TraesCS5A01G545600.3	Wheat	cytosol, mitochondrion	60.0	66.14
TraesCS4B01G379300.1	Wheat	cytosol, mitochondrion	51.07	65.6
GSMUA_Achr4P17850_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	52.5	62.82
HORVU4Hr1G090280.3	Barley	cytosol	58.93	60.89
CDY64781	Canola	cytosol	57.14	60.15
Bra025515.1-P	Field mustard	cytosol	57.5	59.85
CDY48948	Canola	cytosol	56.79	58.67
Zm00001d000052_P004	Maize	cytosol	59.29	57.44
GSMUA_Achr4P17860_001	Banana	cytosol	36.07	57.39
GSMUA_Achr6P11870_001	Banana	cytosol, plastid	52.86	51.03
GSMUA_Achr2P21300_001	Banana	cytosol	49.64	49.29
Bra012652.1-P	Field mustard	cytosol	54.29	46.63

Protein Annotations

Gene3D:1.10.1820.10	MapMan:18.4.3.9.2	Gene3D:2.20.25.20	InterPro:Casein_kin_II_reg-sub_N	InterPro:Casein_kinase_II_beta_like	InterPro:Casein_kinase_II_reg-sub
GO:GO:0003674	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005956	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019887	GO:GO:0030234
GO:GO:0045859	EnsemblPlantsGene:GSMUA_Achr4G30080_001	EnsemblPlants:GSMUA_Achr4P30080_001	EnsemblPlants:GSMUA_Achr4T30080_001	InterPro:IPR016149	UniProt:M0STC0
PFAM:PF01214	PRINTS:PR00472	ScanProsite:PS01101	PANTHER:PTHR11740	PANTHER:PTHR11740:SF15	SMART:SM01085
SUPFAM:SSF57798	UniParc:UPI0002955A79	SEG:seg	:	:	:

Description

Putative casein kinase II subunit beta-4 [Source:GMGC_GENE;Acc:GSMUA_Achr4G30080_001]

Coordinates

chr4:+:27824449..27829357

Molecular Weight (calculated)

31758.3 Da

IEP (calculated)

5.106

GRAVY (calculated)

-0.639

Length

280 amino acids

Sequence
(BLAST)

001: MSRERGGSGS KAEIGAVDRK RINDVLDKHL EKSPPSASRG LNSKEKDRML VPSTSSGKQP EPRSLLKSKC SDEESETDSE ESDVSGSDME DTSWISWFCN
101: LRGNEFFCEV DDEYIQDDFN LCGLSSQVPY YDYALDLILD IESSHGDTFT EEQNELVESA AEMLYGLIHV RYILTSKGMA AMLEKFKNYD FGRCPRVYCC
201: GQPCLPVGQS DIPRSSTVKI YCPKCEDIYY PRSKYQGNID GAYFGTTFPH LFLMTYGHLK PQKPSQRYVP RVFGFKLHKP

Best Arabidopsis Sequence Match ( AT2G44680.1 )
(BLAST)

001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ

Arabidopsis Description

CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.