Factsheet for GSMUA_Achr8P14950_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P26360_001	Banana	cytosol	79.93	81.07
GSMUA_Achr4P30080_001	Banana	cytosol	79.23	80.36
GSMUA_AchrUn_...	Banana	cytosol	77.46	78.57
TraesCS2D01G242000.2	Wheat	cytosol	71.83	75.84
TraesCS2A01G245100.1	Wheat	cytosol	71.83	75.28
KXG36270	Sorghum	cytosol	72.89	75.27
Zm00001d021557_P001	Maize	cytosol	72.18	75.09
EER91910	Sorghum	cytosol	66.2	71.76
TraesCSU01G007300.1	Wheat	cytosol	69.01	71.27
TraesCS1B01G229200.1	Wheat	cytosol	69.01	71.27
TraesCS1A01G215700.1	Wheat	cytosol	69.01	71.27
Os07t0495100-01	Rice	cytosol	72.18	71.18
Zm00001d029978_P001	Maize	cytosol	54.93	70.91
HORVU1Hr1G055250.1	Barley	cytosol	68.66	70.91
Os10t0564900-01	Rice	cytosol	69.01	70.25
GSMUA_Achr2P10400_001	Banana	cytosol	79.93	69.85
HORVU2Hr1G092930.1	Barley	cytosol	66.2	67.87
TraesCS2D01G388200.1	Wheat	cytosol	66.2	67.87
TraesCS2B01G408900.1	Wheat	cytosol	66.2	67.87
TraesCS2A01G390500.1	Wheat	cytosol	66.2	67.87
Zm00001d006440_P003	Maize	cytosol	71.48	67.22
OQU82060	Sorghum	cytosol	64.08	65.47
TraesCSU01G129600.1	Wheat	cytosol, mitochondrion	57.04	64.03
TraesCS5A01G545600.3	Wheat	cytosol, mitochondrion	57.04	63.78
Zm00001d002778_P001	Maize	nucleus	53.17	62.92
TraesCS4B01G379300.1	Wheat	cytosol, mitochondrion	47.89	62.39
HORVU4Hr1G090280.3	Barley	cytosol	56.34	59.04
GSMUA_Achr4P17850_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	48.59	58.97
CDY64781	Canola	cytosol	53.52	57.14
CDY48948	Canola	cytosol	53.52	56.09
Bra025515.1-P	Field mustard	cytosol	52.46	55.39
Zm00001d000052_P004	Maize	cytosol	52.82	51.9
GSMUA_Achr4P17860_001	Banana	cytosol	31.69	51.14
GSMUA_Achr6P11870_001	Banana	cytosol, plastid	48.94	47.93
GSMUA_Achr2P21300_001	Banana	cytosol	47.18	47.52
Bra012652.1-P	Field mustard	cytosol	51.06	44.48

Protein Annotations

Gene3D:1.10.1820.10	MapMan:18.4.3.9.2	Gene3D:2.20.25.20	InterPro:Casein_kin_II_reg-sub_N	InterPro:Casein_kinase_II_beta_like	InterPro:Casein_kinase_II_reg-sub
GO:GO:0003674	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005956	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019887	GO:GO:0030234
GO:GO:0045859	EnsemblPlantsGene:GSMUA_Achr8G14950_001	EnsemblPlants:GSMUA_Achr8P14950_001	EnsemblPlants:GSMUA_Achr8T14950_001	InterPro:IPR016149	UniProt:M0TQJ8
PFAM:PF01214	PRINTS:PR00472	PANTHER:PTHR11740	PANTHER:PTHR11740:SF15	SMART:SM01085	SUPFAM:SSF57798
UniParc:UPI000296C8BB	SEG:seg	:	:	:	:

Description

Putative casein kinase II subunit beta-4 [Source:GMGC_GENE;Acc:GSMUA_Achr8G14950_001]

Coordinates

chr8:-:12460278..12464693

Molecular Weight (calculated)

32391.2 Da

IEP (calculated)

5.606

GRAVY (calculated)

-0.445

Length

284 amino acids

Sequence
(BLAST)

001: MYRDRGFIVP KAETGAVGRK RISDALDKHL EKTSPSTSRG LNSKAKDWLH VPPTSVPDYL FYSLLHLQIQ DNSSFKITSP ETDSEESDVS GSDGDTSWIS
101: WFCNLRGNEF FCEVDDEYIQ DEFNLCGLSS QVPYFDCALD LILDLESSHG DMFTEEQNEL VESAAEMLYG LIHVRYILTS RGMAAMLDKF KNYDFGRCPR
201: VYCCGQPCFP VGQSDIPRSS TVKIYCPKCE DIYYPRSKYQ ANVDGAYFGT TFPHLFLMAY GHLKPQRPSQ KYVPRVFGYK VHKP

Best Arabidopsis Sequence Match ( AT2G44680.1 )
(BLAST)

001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ

Arabidopsis Description

CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.