Factsheet for GSMUA_Achr2P21300_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P11870_001	Banana	cytosol, plastid	64.18	62.41
GSMUA_Achr4P30080_001	Banana	cytosol	49.29	49.64
GSMUA_AchrUn_...	Banana	cytosol	49.29	49.64
GSMUA_Achr4P26360_001	Banana	cytosol	48.23	48.57
GSMUA_Achr8P14950_001	Banana	cytosol	47.52	47.18
GSMUA_Achr2P10400_001	Banana	cytosol	49.29	42.77
GSMUA_Achr4P17850_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	33.33	40.17
GSMUA_Achr4P17860_001	Banana	cytosol	17.02	27.27

Protein Annotations

Gene3D:1.10.1820.10	MapMan:18.4.3.9.2	Gene3D:2.20.25.20	InterPro:Casein_kin_II_reg-sub_N	InterPro:Casein_kinase_II_beta_like	InterPro:Casein_kinase_II_reg-sub
GO:GO:0003674	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005956	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019887	GO:GO:0030234
GO:GO:0045859	EnsemblPlantsGene:GSMUA_Achr2G21300_001	EnsemblPlants:GSMUA_Achr2P21300_001	EnsemblPlants:GSMUA_Achr2T21300_001	InterPro:IPR016149	UniProt:M0S9X1
PFAM:PF01214	PRINTS:PR00472	ScanProsite:PS01101	PANTHER:PTHR11740	PANTHER:PTHR11740:SF15	SMART:SM01085
SUPFAM:SSF57798	UniParc:UPI000295D9E1	:	:	:	:

Description

Casein kinase II subunit beta [Source:GMGC_GENE;Acc:GSMUA_Achr2G21300_001]

Coordinates

chr2:+:20837759..20842551

Molecular Weight (calculated)

31132.6 Da

IEP (calculated)

5.189

GRAVY (calculated)

-0.495

Length

282 amino acids

Sequence
(BLAST)

001: MLKTGSTPRD RAVRSNANPN PNPSTGSAIE PIPKTSLMVA LSNAGSKRRP EGASSSMQLT SKEAKLKNSK PTPELSETGI EETDLSTSDE DASSWISWFC
101: GLRGNEFLCE VDEDYIQDDF NLCGLQAQIS YYDNALDMIL DNDSFSGDID GEENSEIEPA AELLYGLIHA RYVVTTRGLN AMHEKYKKAD FGRCPRVFCG
201: GQPCLPVGIS DIPHSGSVRI YCPKCDDVYF PRCKYQSDMD GAYIGTTFPH LYLMTYPSAK SAMTVQHYVP KVYGFKLHKG SK

Best Arabidopsis Sequence Match ( AT2G44680.1 )
(BLAST)

001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ

Arabidopsis Description

CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.