CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48948	Canola	cytosol	90.98	89.3
CDX78786	Canola	cytosol	63.53	60.36
CDX90462	Canola	cytosol	64.66	60.35
CDY09612	Canola	cytosol	64.29	60.0
CDY38414	Canola	cytosol	63.16	59.15
TraesCS2D01G242000.2	Wheat	cytosol	57.89	57.25
GSMUA_Achr4P30080_001	Banana	cytosol	60.15	57.14
TraesCS2A01G245100.1	Wheat	cytosol	57.89	56.83
Zm00001d021557_P001	Maize	cytosol	58.27	56.78
KXG36270	Sorghum	cytosol	58.65	56.73
CDY28980	Canola	cytosol	59.02	56.68
CDY40582	Canola	cytosol	58.65	56.52
GSMUA_AchrUn_...	Banana	cytosol	59.4	56.43
EER91910	Sorghum	cytosol	55.26	56.11
GSMUA_Achr4P26360_001	Banana	cytosol	59.02	56.07
CDX74677	Canola	cytosol	55.64	55.43
TraesCSU01G007300.1	Wheat	cytosol	57.14	55.27
TraesCS1B01G229200.1	Wheat	cytosol	57.14	55.27
HORVU1Hr1G055250.1	Barley	cytosol	57.14	55.27
TraesCS1A01G215700.1	Wheat	cytosol	57.14	55.27
CDY64765	Canola	cytosol	55.26	55.06
CDY41181	Canola	cytosol	54.14	54.75
CDX71824	Canola	cytosol	54.14	54.75
Zm00001d029978_P001	Maize	cytosol	45.11	54.55
CDY48249	Canola	cytosol	54.51	54.1
Os07t0495100-01	Rice	cytosol	58.27	53.82
GSMUA_Achr8P14950_001	Banana	cytosol	57.14	53.52
CDX83421	Canola	cytosol	55.26	53.45
CDX95610	Canola	cytosol	55.26	53.45
Os10t0564900-01	Rice	cytosol	56.02	53.41
Zm00001d002778_P001	Maize	nucleus	48.12	53.33
OQU82060	Sorghum	cytosol	55.64	53.24
TraesCS2D01G388200.1	Wheat	cytosol	54.89	52.71
TraesCS2B01G408900.1	Wheat	cytosol	54.89	52.71
TraesCS2A01G390500.1	Wheat	cytosol	54.89	52.71
HORVU2Hr1G092930.1	Barley	cytosol	54.89	52.71
CDX77739	Canola	cytosol	49.25	52.61
TraesCSU01G129600.1	Wheat	cytosol, mitochondrion	48.87	51.38
Zm00001d006440_P003	Maize	cytosol	57.89	50.99
TraesCS5A01G545600.3	Wheat	cytosol, mitochondrion	48.5	50.79
TraesCS4B01G379300.1	Wheat	cytosol, mitochondrion	40.98	50.0
GSMUA_Achr2P10400_001	Banana	cytosol	59.4	48.62
HORVU4Hr1G090280.3	Barley	cytosol	47.37	46.49
Zm00001d000052_P004	Maize	cytosol	43.98	40.48

Protein Annotations

Gene3D:1.10.1820.10	MapMan:18.4.3.9.2	Gene3D:2.20.25.20	GO:A0A078JGL5	UniProt:A0A078JGL5	EnsemblPlants:CDY64781
ProteinID:CDY64781	ProteinID:CDY64781.1	InterPro:Casein_kin_II_reg-sub_N	InterPro:Casein_kinase_II_beta_like	InterPro:Casein_kinase_II_reg-sub	GO:GO:0003674
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005956	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019887	GO:GO:0030234	GO:GO:0045859
EnsemblPlantsGene:GSBRNA2T00042717001	InterPro:IPR016149	PFAM:PF01214	PRINTS:PR00472	PANTHER:PTHR11740	PANTHER:PTHR11740:SF15
SMART:SM01085	SUPFAM:SSF57798	UniParc:UPI0004EC0735	SEG:seg	:	:

Description

BnaCnng44870DCasein kinase II subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A078JGL5]

Coordinates

chrLK034549:+:10026..11245

Molecular Weight (calculated)

29745.0 Da

IEP (calculated)

5.017

GRAVY (calculated)

-0.371

Length

266 amino acids

Sequence
(BLAST)

001: MFTGRGTVGP KAEVVDREGT SEAYDGKETA GANSVLMGKQ MRDCRSAALS RTDIFQAVDT SEGSEVSGSD EEDLAWTTWF CKLPGNEFLC EVDDYFILDD
101: FNLCGLRHQV PYYDHALDLI LDDDSSSHGK MITDEQNELI ESSAEMLYGL IHARYILTSK GFLSMVNKYD KHEFGRCPRV YCCGQSCLPV ALSDVPGAST
201: VKIYCPKCED IYHPPSNYQG SSNIDGAYFG TAFPHLFLMY YSSRRPKKVS SQSYVPRVFG FKLHKP

Best Arabidopsis Sequence Match ( AT2G44680.1 )
(BLAST)

001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ

Arabidopsis Description

CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.