Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G47080.1 | CDX80051 | AT2G46830.1 | 9724822 |
| AT5G47080.1 | CDX80052 | AT2G46830.1 | 9724822 |
| AT5G47080.1 | CDY41563 | AT2G46830.1 | 9724822 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28980 | Canola | cytosol | 87.55 | 78.7 |
| CDY40582 | Canola | cytosol | 84.74 | 76.45 |
| AT5G47080.1 | Thale cress | cytosol | 85.14 | 73.87 |
| CDX90462 | Canola | cytosol | 73.9 | 64.56 |
| CDY09612 | Canola | cytosol | 73.49 | 64.21 |
| CDX78786 | Canola | cytosol | 69.48 | 61.79 |
| CDY38414 | Canola | cytosol | 69.48 | 60.92 |
| HORVU2Hr1G092930.1 | Barley | cytosol | 67.47 | 60.65 |
| TraesCS2A01G390500.1 | Wheat | cytosol | 67.47 | 60.65 |
| TraesCS2B01G408900.1 | Wheat | cytosol | 67.47 | 60.65 |
| TraesCS2D01G388200.1 | Wheat | cytosol | 67.47 | 60.65 |
| CDY41181 | Canola | cytosol | 63.45 | 60.08 |
| CDY64765 | Canola | cytosol | 64.26 | 59.93 |
| CDX71824 | Canola | cytosol | 62.25 | 58.94 |
| TraesCS2D01G242000.2 | Wheat | cytosol | 63.45 | 58.74 |
| TraesCS2A01G245100.1 | Wheat | cytosol | 63.45 | 58.3 |
| Zm00001d021557_P001 | Maize | cytosol | 63.45 | 57.88 |
| OQU82060 | Sorghum | cytosol | 64.26 | 57.55 |
| CDX83421 | Canola | cytosol | 63.45 | 57.45 |
| Zm00001d029978_P001 | Maize | cytosol | 50.6 | 57.27 |
| KXG36270 | Sorghum | cytosol | 63.05 | 57.09 |
| CDX95610 | Canola | cytosol | 62.65 | 56.73 |
| TraesCS1A01G215700.1 | Wheat | cytosol | 62.25 | 56.36 |
| TraesCS1B01G229200.1 | Wheat | cytosol | 62.25 | 56.36 |
| HORVU1Hr1G055250.1 | Barley | cytosol | 62.25 | 56.36 |
| TraesCSU01G007300.1 | Wheat | cytosol | 62.25 | 56.36 |
| EER91910 | Sorghum | cytosol | 59.04 | 56.11 |
| Zm00001d002778_P001 | Maize | nucleus | 53.01 | 55.0 |
| Os10t0564900-01 | Rice | cytosol | 61.45 | 54.84 |
| Os07t0495100-01 | Rice | cytosol | 63.05 | 54.51 |
| CDY48249 | Canola | cytosol | 57.43 | 53.36 |
| CDX74677 | Canola | cytosol | 56.63 | 52.81 |
| Zm00001d006440_P003 | Maize | cytosol | 61.45 | 50.66 |
| TraesCSU01G129600.1 | Wheat | cytosol, mitochondrion | 50.2 | 49.41 |
| CDY64781 | Canola | cytosol | 52.61 | 49.25 |
| CDY48948 | Canola | cytosol | 53.01 | 48.71 |
| TraesCS5A01G545600.3 | Wheat | cytosol, mitochondrion | 49.4 | 48.43 |
| TraesCS4B01G379300.1 | Wheat | cytosol, mitochondrion | 42.17 | 48.17 |
| HORVU4Hr1G090280.3 | Barley | cytosol | 49.4 | 45.39 |
| Zm00001d000052_P004 | Maize | cytosol | 48.19 | 41.52 |
Protein Annotations
| Gene3D:1.10.1820.10 | MapMan:18.4.3.9.2 | Gene3D:2.20.25.20 | GO:A0A078CNX7 | EnsemblPlants:CDX77739 | ProteinID:CDX77739 |
| ProteinID:CDX77739.1 | InterPro:Casein_kin_II_reg-sub_N | InterPro:Casein_kinase_II_beta_like | InterPro:Casein_kinase_II_reg-sub | GO:GO:0003674 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005956 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019887 | GO:GO:0030234 | EnsemblPlantsGene:GSBRNA2T00128761001 | InterPro:IPR016149 |
| PFAM:PF01214 | PRINTS:PR00472 | ScanProsite:PS01101 | PANTHER:PTHR11740 | PANTHER:PTHR11740:SF15 | SMART:SM01085 |
| SUPFAM:SSF57798 | UniParc:UPI0004EF4919 | SEG:seg | : | : | : |
Description
BnaC07g19930D
Coordinates
chrLK031812:-:1475692..1477319
Molecular Weight (calculated)
28037.9 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.677
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRERGTAGS RSEEVVDRKR INNQALERPS PSTSRQANGK GKGIVLTGKQ PHDSRDSRSA SLSKNNVSDD ESDTDSEEEE ESDVSGSDTS WQSCSLLRVY
101: EYALDLILDV ESSHGEMFTE EQNELIESAA EMLYGLIHAR YILTTKGLAA MLDKYKNYDF GRCPRVYCCG QPCLPVGLSD LPRSSTVKIY CPKCQDIYYP
201: RSKYQGNIDG AFFGTTFPHL FLMTYGHLKP PKATQNYVPR VFGFKLHKP
101: EYALDLILDV ESSHGEMFTE EQNELIESAA EMLYGLIHAR YILTTKGLAA MLDKYKNYDF GRCPRVYCCG QPCLPVGLSD LPRSSTVKIY CPKCQDIYYP
201: RSKYQGNIDG AFFGTTFPHL FLMTYGHLKP PKATQNYVPR VFGFKLHKP
001: MYRERGMVGS KSEVVDRKRI NEIHDNRPSH SMSQPVNGKG KVTSTSVLMG KQQLHDKESS RSGSISKTNI SDAVDISDTD SEESEVSGSD GEDTSWISWF
101: CNLRGNEFFC EVDDDYIQDD FNLCGLSHQV PYYDYALDLI LDVESSHGEM FTEEQNELIE SAAEMLYGMI HARFILTSKG LASMLDKYKN YDFGRCPRVY
201: CCGQPCLPVG QSDIPRASTV KIYCPKCEDV YYPRSKYQGN IDGAYFGTTF PHLFLMTYGH LKPQKASQSY TQRVFGFKLH KP
101: CNLRGNEFFC EVDDDYIQDD FNLCGLSHQV PYYDYALDLI LDVESSHGEM FTEEQNELIE SAAEMLYGMI HARFILTSKG LASMLDKYKN YDFGRCPRVY
201: CCGQPCLPVG QSDIPRASTV KIYCPKCEDV YYPRSKYQGN IDGAYFGTTF PHLFLMTYGH LKPQKASQSY TQRVFGFKLH KP
Arabidopsis Description
CKB2Casein kinase II subunit beta-2 [Source:UniProtKB/Swiss-Prot;Acc:P40229]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.