Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74677 | Canola | cytosol | 95.52 | 95.88 |
| Bra004856.1-P | Field mustard | cytosol | 89.93 | 91.98 |
| CDY41181 | Canola | cytosol | 77.99 | 79.47 |
| CDX71824 | Canola | cytosol | 77.61 | 79.09 |
| AT2G44680.1 | Thale cress | cytosol | 82.84 | 78.45 |
| CDY64765 | Canola | cytosol | 77.99 | 78.28 |
| CDX83421 | Canola | cytosol | 79.1 | 77.09 |
| CDX95610 | Canola | cytosol | 78.36 | 76.36 |
| Solyc01g088740.2.1 | Tomato | cytosol | 75.75 | 70.98 |
| VIT_02s0012g00080.t01 | Wine grape | cytosol | 70.15 | 70.68 |
| TraesCS2D01G242000.2 | Wheat | cytosol | 70.9 | 70.63 |
| TraesCS2A01G245100.1 | Wheat | cytosol | 70.9 | 70.11 |
| Zm00001d021557_P001 | Maize | cytosol | 71.27 | 69.96 |
| PGSC0003DMT400004353 | Potato | cytosol | 75.37 | 69.42 |
| KXG36270 | Sorghum | cytosol | 70.9 | 69.09 |
| EER91910 | Sorghum | cytosol | 66.42 | 67.94 |
| Zm00001d029978_P001 | Maize | cytosol | 55.22 | 67.27 |
| HORVU1Hr1G055250.1 | Barley | cytosol | 68.28 | 66.55 |
| TraesCSU01G007300.1 | Wheat | cytosol | 68.28 | 66.55 |
| TraesCS1B01G229200.1 | Wheat | cytosol | 68.28 | 66.55 |
| TraesCS1A01G215700.1 | Wheat | cytosol | 68.28 | 66.55 |
| Os07t0495100-01 | Rice | cytosol | 71.27 | 66.32 |
| Solyc05g050680.2.1 | Tomato | nucleus | 70.52 | 66.32 |
| Os10t0564900-01 | Rice | cytosol | 69.03 | 66.31 |
| TraesCSU01G129600.1 | Wheat | cytosol, mitochondrion | 61.94 | 65.61 |
| CDX78786 | Canola | cytosol | 67.91 | 65.0 |
| TraesCS2A01G390500.1 | Wheat | cytosol | 66.79 | 64.62 |
| TraesCS2B01G408900.1 | Wheat | cytosol | 66.79 | 64.62 |
| TraesCS2D01G388200.1 | Wheat | cytosol | 66.79 | 64.62 |
| HORVU2Hr1G092930.1 | Barley | cytosol | 66.79 | 64.62 |
| TraesCS5A01G545600.3 | Wheat | cytosol, mitochondrion | 61.19 | 64.57 |
| TraesCS4B01G379300.1 | Wheat | cytosol, mitochondrion | 51.49 | 63.3 |
| CDY40582 | Canola | cytosol | 64.93 | 63.04 |
| CDY38414 | Canola | cytosol | 66.79 | 63.03 |
| CDY09612 | Canola | cytosol | 66.79 | 62.81 |
| CDX90462 | Canola | cytosol | 66.42 | 62.46 |
| CDY28980 | Canola | cytosol | 64.55 | 62.45 |
| Zm00001d006440_P003 | Maize | cytosol | 69.78 | 61.92 |
| OQU82060 | Sorghum | cytosol | 63.43 | 61.15 |
| HORVU4Hr1G090280.3 | Barley | cytosol | 61.19 | 60.52 |
| Zm00001d002778_P001 | Maize | nucleus | 52.99 | 59.17 |
| CDX77739 | Canola | cytosol | 53.36 | 57.43 |
| PGSC0003DMT400018024 | Potato | mitochondrion | 65.3 | 56.63 |
| CDY64781 | Canola | cytosol | 54.1 | 54.51 |
| CDY48948 | Canola | cytosol | 54.48 | 53.87 |
| GSMUA_Achr4P17850_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 45.9 | 52.56 |
| Zm00001d000052_P004 | Maize | cytosol | 54.48 | 50.52 |
Protein Annotations
| Gene3D:1.10.1820.10 | MapMan:18.4.3.9.2 | Gene3D:2.20.25.20 | GO:A0A078IFV5 | UniProt:A0A078IFV5 | EnsemblPlants:CDY48249 |
| ProteinID:CDY48249 | ProteinID:CDY48249.1 | InterPro:Casein_kin_II_reg-sub_N | InterPro:Casein_kinase_II_beta_like | InterPro:Casein_kinase_II_reg-sub | GO:GO:0003674 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005956 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019887 | GO:GO:0030234 | GO:GO:0045859 |
| EnsemblPlantsGene:GSBRNA2T00089115001 | InterPro:IPR016149 | PFAM:PF01214 | PRINTS:PR00472 | ScanProsite:PS01101 | PANTHER:PTHR11740 |
| PANTHER:PTHR11740:SF15 | SMART:SM01085 | SUPFAM:SSF57798 | UniParc:UPI0004EF1EA2 | SEG:seg | : |
Description
BnaC04g05080DCasein kinase II subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A078IFV5]
Coordinates
chrLK032762:-:54487..56324
Molecular Weight (calculated)
30044.3 Da
IEP (calculated)
5.063
GRAVY (calculated)
-0.506
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKGRSGITM GGGGSSSRSE LLGGATDRKR INEALDKHLK KSLDKDSFPS TSTNKSHLHE VESEGLDVSG SEGDEEEETS WISWFCNLRG NEFFCEVDED
101: YVQDDFNLCG LSGLVPYYDY ALDLILDVES SNGDIFTEEQ NELVESAAEM LYGLIHVRYI LTTKGMAAML EKYKNCDFGR CPRVFCSGQS CLPVGQSDIP
201: RSSTVKIYCP KCEDLYYPRS KYQGNIDGAY FGTTFPHLFL MAHGNVKPQK PSQSYVPKIF GFKVHKKQ
101: YVQDDFNLCG LSGLVPYYDY ALDLILDVES SNGDIFTEEQ NELVESAAEM LYGLIHVRYI LTTKGMAAML EKYKNCDFGR CPRVFCSGQS CLPVGQSDIP
201: RSSTVKIYCP KCEDLYYPRS KYQGNIDGAY FGTTFPHLFL MAHGNVKPQK PSQSYVPKIF GFKVHKKQ
001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ
Arabidopsis Description
CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.