Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004856.1-P | Field mustard | cytosol | 79.15 | 85.5 |
| AT3G60250.1 | Thale cress | cytosol | 83.04 | 85.14 |
| Bra000359.1-P | Field mustard | cytosol | 82.33 | 84.73 |
| CDX83421 | Canola | cytosol | 81.98 | 84.36 |
| CDX95610 | Canola | cytosol | 81.27 | 83.64 |
| CDX74677 | Canola | cytosol | 78.8 | 83.52 |
| CDY48249 | Canola | cytosol | 78.45 | 82.84 |
| Solyc01g088740.2.1 | Tomato | cytosol | 78.45 | 77.62 |
| PGSC0003DMT400004353 | Potato | cytosol | 79.15 | 76.98 |
| VIT_02s0012g00080.t01 | Wine grape | cytosol | 70.32 | 74.81 |
| TraesCS2D01G242000.2 | Wheat | cytosol | 71.02 | 74.72 |
| TraesCS2A01G245100.1 | Wheat | cytosol | 71.02 | 74.17 |
| Zm00001d021557_P001 | Maize | cytosol | 71.38 | 73.99 |
| KXG36270 | Sorghum | cytosol | 71.38 | 73.45 |
| Solyc05g050680.2.1 | Tomato | nucleus | 72.79 | 72.28 |
| EER91910 | Sorghum | cytosol | 66.43 | 71.76 |
| Zm00001d029978_P001 | Maize | cytosol | 55.12 | 70.91 |
| Os07t0495100-01 | Rice | cytosol | 72.08 | 70.83 |
| TraesCS1A01G215700.1 | Wheat | cytosol | 67.84 | 69.82 |
| TraesCS1B01G229200.1 | Wheat | cytosol | 67.84 | 69.82 |
| HORVU1Hr1G055250.1 | Barley | cytosol | 67.84 | 69.82 |
| TraesCSU01G007300.1 | Wheat | cytosol | 67.84 | 69.82 |
| Os10t0564900-01 | Rice | cytosol | 68.55 | 69.53 |
| HORVU2Hr1G092930.1 | Barley | cytosol | 67.49 | 68.95 |
| TraesCS2A01G390500.1 | Wheat | cytosol | 67.49 | 68.95 |
| TraesCS2B01G408900.1 | Wheat | cytosol | 67.49 | 68.95 |
| TraesCS2D01G388200.1 | Wheat | cytosol | 67.49 | 68.95 |
| AT5G47080.1 | Thale cress | cytosol | 68.9 | 67.94 |
| TraesCS5A01G545600.3 | Wheat | cytosol, mitochondrion | 60.07 | 66.93 |
| TraesCSU01G129600.1 | Wheat | cytosol, mitochondrion | 59.72 | 66.8 |
| Zm00001d006440_P003 | Maize | cytosol | 70.32 | 65.89 |
| AT4G17640.1 | Thale cress | cytosol | 65.37 | 65.6 |
| TraesCS4B01G379300.1 | Wheat | cytosol, mitochondrion | 50.53 | 65.6 |
| OQU82060 | Sorghum | cytosol | 64.31 | 65.47 |
| Zm00001d002778_P001 | Maize | nucleus | 54.77 | 64.58 |
| PGSC0003DMT400018024 | Potato | mitochondrion | 68.9 | 63.11 |
| HORVU4Hr1G090280.3 | Barley | cytosol | 59.36 | 61.99 |
| GSMUA_Achr4P17850_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 45.23 | 54.7 |
| Zm00001d000052_P004 | Maize | cytosol | 53.36 | 52.25 |
Protein Annotations
| Gene3D:1.10.1820.10 | MapMan:18.4.3.9.2 | Gene3D:2.20.25.20 | EntrezGene:819076 | ProteinID:AAC27470.1 | ProteinID:AEC10454.1 |
| ProteinID:AEC10455.1 | ArrayExpress:AT2G44680 | EnsemblPlantsGene:AT2G44680 | RefSeq:AT2G44680 | TAIR:AT2G44680 | RefSeq:AT2G44680-TAIR-G |
| EnsemblPlants:AT2G44680.1 | TAIR:AT2G44680.1 | EMBL:AY052265 | EMBL:AY060523 | EMBL:AY062585 | EMBL:AY088075 |
| EMBL:AY093344 | Unigene:At.12539 | Symbol:CKB4 | InterPro:Casein_kin_II_reg-sub_N | InterPro:Casein_kinase_II_beta_like | InterPro:Casein_kinase_II_reg-sub |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004674 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005956 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0007275 | GO:GO:0007623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009628 |
| GO:GO:0009791 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0019887 |
| GO:GO:0030234 | GO:GO:0042753 | GO:GO:0045859 | GO:GO:0048573 | InterPro:IPR016149 | RefSeq:NP_181996.1 |
| RefSeq:NP_850421.1 | UniProt:O80507 | PFAM:PF01214 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00472 | ScanProsite:PS01101 |
| PANTHER:PTHR11740 | PANTHER:PTHR11740:SF15 | SMART:SM01085 | SUPFAM:SSF57798 | UniParc:UPI0000001446 | SEG:seg |
Description
CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
Coordinates
chr2:-:18426481..18428397
Molecular Weight (calculated)
31633.1 Da
IEP (calculated)
5.197
GRAVY (calculated)
-0.567
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.