Factsheet for HORVU4Hr1G069390.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU1Hr1G055250.1
HORVU2Hr1G016740.4
HORVU2Hr1G092930.1
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU4Hr1G090280.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4
HORVU7Hr1G070870.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23080.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT2G23080.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT2G23080.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT2G23080.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT2G23080.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT2G23080.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT2G23080.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT2G23080.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT2G23080.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT2G23080.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT2G23080.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT2G23080.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT2G23080.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT2G23080.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT2G23080.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT2G23080.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT2G23080.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT2G23080.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT2G23080.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT2G23080.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT2G23080.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT2G23080.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT2G23080.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT2G23080.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592
AT5G67380.1	HORVU7Hr1G070870.2	AT2G46830.1	14978263
AT5G67380.1	HORVU7Hr1G070870.2	AT2G46830.1	9724822
AT5G67380.1	HORVU1Hr1G055250.1	AT3G60250.1	10535927
AT5G67380.1	HORVU2Hr1G092930.1	AT3G60250.1	10535927
AT5G67380.1	HORVU4Hr1G090280.3	AT3G60250.1	10535927
AT5G67380.1	HORVU1Hr1G055250.1	AT5G47080.1	10535927
AT5G67380.1	HORVU2Hr1G092930.1	AT5G47080.1	10535927
AT5G67380.1	HORVU4Hr1G090280.3	AT5G47080.1	10535927

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G254800.1	Wheat	cytosol	98.19	99.09
TraesCS4D01G254600.1	Wheat	cytosol	98.8	98.8
TraesCS4A01G049900.1	Wheat	cytosol	97.89	97.89
Os03t0207300-01	Rice	cytosol	91.57	91.57
HORVU2Hr1G063420.1	Barley	cytosol	88.55	88.29
GSMUA_Achr6P16850_001	Banana	cytosol	87.65	87.39
GSMUA_Achr10P...	Banana	cytosol	87.35	87.09
VIT_18s0001g09320.t01	Wine grape	cytosol	87.05	86.79
Solyc03g044140.2.1	Tomato	cytosol, nucleus	87.05	86.79
CDY57359	Canola	cytosol	86.75	86.75
CDX83104	Canola	cytosol	85.84	86.63
Bra029986.1-P	Field mustard	cytosol	85.84	86.63
CDY30613	Canola	cytosol	86.75	86.49
KRH28388	Soybean	cytosol	86.75	86.49
KRH77093	Soybean	nucleus	86.45	86.19
CDY57680	Canola	cytosol	86.45	86.19
PGSC0003DMT400064191	Potato	cytosol	86.14	85.89
Solyc02g092640.2.1	Tomato	cytosol, nucleus	86.14	85.89
AT2G23080.1	Thale cress	cytosol	84.64	84.38
CDY70654	Canola	cytosol	43.67	84.3
HORVU5Hr1G097230.1	Barley	cytosol, plastid	86.75	75.39
CDX98044	Canola	cytosol	35.84	74.38
Bra036044.1-P	Field mustard	plasma membrane	86.75	74.04
Bra036806.1-P	Field mustard	cytosol	74.7	73.59
KRH04471	Soybean	nucleus	87.65	73.12
VIT_07s0129g00410.t01	Wine grape	golgi, plasma membrane	87.05	71.36
AT3G50000.1	Thale cress	golgi, plasma membrane, vacuole	86.45	71.22
KRH58068	Soybean	mitochondrion	87.05	70.32
AT5G67380.1	Thale cress	golgi, plasma membrane	86.45	70.17
HORVU4Hr1G030100.1	Barley	cytosol	19.28	69.57
Bra031829.1-P	Field mustard	cytosol	56.93	68.98
CDY71648	Canola	plastid	29.52	60.87
CDY67469	Canola	vacuole	52.41	59.39
CDY15289	Canola	vacuole	47.59	57.25
HORVU5Hr1G097400.2	Barley	cytosol, mitochondrion, nucleus, plastid	73.8	57.24
CDY29766	Canola	golgi, plasma membrane	60.24	56.5
CDY25489	Canola	golgi, plasma membrane	55.12	37.65
HORVU4Hr1G079520.3	Barley	cytosol	21.99	29.32
HORVU6Hr1G008360.2	Barley	mitochondrion, peroxisome, plasma membrane	16.87	24.89
HORVU3Hr1G034440.2	Barley	cytosol	30.42	24.88
HORVU3Hr1G026020.3	Barley	mitochondrion	30.72	24.64
HORVU1Hr1G016490.9	Barley	cytosol	29.52	23.9
HORVU5Hr1G117030.1	Barley	cytosol	28.92	23.53
HORVU2Hr1G051860.1	Barley	cytosol	10.84	21.43
HORVU6Hr1G046490.1	Barley	cytosol	7.83	20.63
HORVU1Hr1G048580.8	Barley	cytosol, nucleus	30.42	17.72
HORVU2Hr1G126490.4	Barley	plastid	13.25	13.37
HORVU7Hr1G035240.1	Barley	cytosol	11.75	12.38

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.9.1	Gene3D:3.30.200.20	EMBL:AK375699	UniProt:F2EHS2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:HORVU4Hr1G069390	EnsemblPlants:HORVU4Hr1G069390.1	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24054	PANTHER:PTHR24054:SF35
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002008DC1
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EHS2]

Coordinates

chrchr4H:+:570517705..570523156

Molecular Weight (calculated)

39234.0 Da

IEP (calculated)

8.274

GRAVY (calculated)

-0.486

Length

332 amino acids

Sequence
(BLAST)

001: MSTARVYADV NVRRPREYWD YEALSVQWGE QDDYEVVRKV GRGKYSEVFE GVNVTNDERC VIKILKPVKK KKIKREIKIL QNLCGGPNII KLLNVVRDQQ
101: SKTPSLVFEY VNSTDFKVLY PTFTDYDIRF YIYELLKALD YCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYFPE KEYNVRVASR YFKGPELLVD
201: FQGYDYSLDM WSLGCMFAGM IFRKEPFFYG HDNHDQLFKI AKVLGTDELN AYLGKYRIVL DPQLEALIGR HNKKPWSKFV NAENRHLVSE EAIDFLDKLL
301: RFDHQDRLTA EEAMAHAYFH QVRAAENSRG RT

Best Arabidopsis Sequence Match ( AT2G23070.1 )
(BLAST)

001: MALRPCTGFT ISSLRNASAA NNNLFSLLSF SSSSPAKRNL LLSSLQDNLR RFASSASLYR QHLRNQQQQH QQQQQSRVKE KSETLAQKIG KSIRRAGAPS
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ

Arabidopsis Description

CKA4Casein kinase II subunit alpha-4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64816]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.