Factsheet for HORVU4Hr1G030100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G077940.1
HORVU3Hr1G030600.8
HORVU4Hr1G030100.1
HORVU5Hr1G097400.2
HORVU5Hr1G125110.10
HORVU6Hr1G050140.1
HORVU7Hr1G069520.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23070.1	HORVU7Hr1G069520.2	AT1G64860.1	22111690
AT2G23070.1	HORVU4Hr1G030100.1	AT2G23070.1	22111690
AT2G23070.1	HORVU5Hr1G097400.2	AT2G23070.1	22111690
AT2G23070.1	HORVU5Hr1G125110.10	AT2G36990.1	22111690
AT2G23070.1	HORVU2Hr1G077940.1	AT3G14180.1	21798944
AT2G23070.1	HORVU6Hr1G050140.1	AT3G14180.1	21798944
AT2G23070.1	HORVU3Hr1G030600.8	AT5G58720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04448	Soybean	nucleus	78.26	20.75
HORVU2Hr1G063420.1	Barley	cytosol	75.0	20.72
CDX76880	Canola	cytosol, mitochondrion	76.09	20.17
HORVU4Hr1G069390.1	Barley	cytosol	69.57	19.28
TraesCS5A01G400900.1	Wheat	mitochondrion, plastid	85.87	19.17
TraesCS5D01G411100.1	Wheat	mitochondrion	85.87	19.13
TraesCS5B01G405700.1	Wheat	mitochondrion, plastid	85.87	19.13
HORVU5Hr1G097400.2	Barley	cytosol, mitochondrion, nucleus, plastid	85.87	18.46
Os03t0763000-01	Rice	plastid	79.35	17.89
KRH58076	Soybean	endoplasmic reticulum	76.09	17.86
HORVU5Hr1G097230.1	Barley	cytosol, plastid	73.91	17.8
KXG37490	Sorghum	mitochondrion	78.26	17.52
Bra032182.1-P	Field mustard	plastid	76.09	17.46
CDY38928	Canola	plastid	76.09	17.46
GSMUA_Achr6P34710_001	Banana	golgi, plasma membrane, vacuole	75.0	17.12
CDX89544	Canola	plastid	76.09	16.79
VIT_07s0129g00270.t01	Wine grape	mitochondrion	77.17	16.75
Bra039942.1-P	Field mustard	plastid	76.09	16.67
CDY49445	Canola	plastid	76.09	16.63
AT2G23070.1	Thale cress	plastid	77.17	16.44
Solyc02g064700.2.1	Tomato	plastid	76.09	16.39
Zm00001d034137_P001	Maize	plastid	59.78	14.03
Zm00001d032025_P001	Maize	mitochondrion	29.35	13.64
GSMUA_Achr9P09590_001	Banana	mitochondrion, plastid	63.04	13.27
HORVU6Hr1G008360.2	Barley	mitochondrion, peroxisome, plasma membrane	27.17	11.11
HORVU4Hr1G079520.3	Barley	cytosol	29.35	10.84
HORVU2Hr1G051860.1	Barley	cytosol	16.3	8.93
HORVU3Hr1G026020.3	Barley	mitochondrion	34.78	7.73
HORVU3Hr1G034440.2	Barley	cytosol	32.61	7.39
HORVU5Hr1G117030.1	Barley	cytosol	31.52	7.11
HORVU1Hr1G016490.9	Barley	cytosol	31.52	7.07
HORVU1Hr1G048580.8	Barley	cytosol, nucleus	32.61	5.26
HORVU7Hr1G035240.1	Barley	cytosol	16.3	4.76
HORVU6Hr1G046490.1	Barley	cytosol	6.52	4.76
HORVU2Hr1G126490.4	Barley	plastid	15.22	4.26
KRH58078	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.9.1	UniProt:A0A287NPY7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:HORVU4Hr1G030100
EnsemblPlants:HORVU4Hr1G030100.1	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24054	PANTHER:PTHR24054:SF33	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000B486540

Description

No Description!

Coordinates

chrchr4H:-:192783098..192784601

Molecular Weight (calculated)

11155.5 Da

IEP (calculated)

6.939

GRAVY (calculated)

-0.253

Length

92 amino acids

Sequence
(BLAST)

1: MIFEYVNNTE FRVLYPTLSD YDMRYYIFEL LKALDFSQSW GIMHRDVKPR NIMIDHEKHQ LCLIDWGLAE FYHPGVEYIV RVSSRCYKGP KL

Best Arabidopsis Sequence Match ( AT2G23070.1 )
(BLAST)

001: MALRPCTGFT ISSLRNASAA NNNLFSLLSF SSSSPAKRNL LLSSLQDNLR RFASSASLYR QHLRNQQQQH QQQQQSRVKE KSETLAQKIG KSIRRAGAPS
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ

Arabidopsis Description

CKA4Casein kinase II subunit alpha-4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64816]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.