Factsheet for GSMUA_Achr9P09590_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P10700_001
GSMUA_Achr3P05880_001
GSMUA_Achr4P30300_001
GSMUA_Achr6P34710_001
GSMUA_Achr7P14310_001
GSMUA_Achr7P14320_001
GSMUA_Achr8P23650_001
GSMUA_Achr9P09590_001
GSMUA_Achr9P14340_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23070.1	GSMUA_Achr11P...	AT1G64860.1	22111690
AT2G23070.1	GSMUA_Achr1P10700_001	AT1G64860.1	22111690
AT2G23070.1	GSMUA_Achr6P34710_001	AT2G23070.1	22111690
AT2G23070.1	GSMUA_Achr9P09590_001	AT2G23070.1	22111690
AT2G23070.1	GSMUA_Achr11P...	AT2G36990.1	22111690
AT2G23070.1	GSMUA_Achr4P30300_001	AT2G36990.1	22111690
AT2G23070.1	GSMUA_Achr3P05880_001	AT3G14180.1	21798944
AT2G23070.1	GSMUA_Achr8P23650_001	AT3G14180.1	21798944
AT2G23070.1	GSMUA_Achr9P14340_001	AT3G14180.1	21798944
AT2G23070.1	GSMUA_Achr7P14310_001	AT5G58720.1	21798944
AT2G23070.1	GSMUA_Achr7P14320_001	AT5G58720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04448	Soybean	nucleus	67.28	84.73
GSMUA_Achr5P01690_001	Banana	cytosol	64.53	84.68
GSMUA_Achr6P16850_001	Banana	cytosol	64.07	84.08
CDX76880	Canola	cytosol, mitochondrion	66.36	83.57
GSMUA_Achr10P...	Banana	cytosol	63.39	83.18
GSMUA_Achr6P34710_001	Banana	golgi, plasma membrane, vacuole	72.54	78.66
Bra032182.1-P	Field mustard	plastid	68.42	74.56
CDY38928	Canola	plastid	68.42	74.56
KRH58076	Soybean	endoplasmic reticulum	66.59	74.23
VIT_07s0129g00270.t01	Wine grape	mitochondrion	71.62	73.82
Solyc02g064700.2.1	Tomato	plastid	72.08	73.77
CDX89544	Canola	plastid	69.57	72.9
Bra039942.1-P	Field mustard	plastid	68.65	71.43
CDY49445	Canola	plastid	68.65	71.26
AT2G23070.1	Thale cress	plastid	70.02	70.83
KRH58078	Soybean	cytosol	2.97	68.42
Zm00001d034137_P001	Maize	plastid	58.35	65.05
KXG37490	Sorghum	mitochondrion	60.18	63.99
Os03t0763000-01	Rice	plastid	59.27	63.48
HORVU4Hr1G030100.1	Barley	cytosol	13.27	63.04
TraesCS5B01G405700.1	Wheat	mitochondrion, plastid	57.44	60.77
TraesCS5A01G400900.1	Wheat	mitochondrion, plastid	57.21	60.68
TraesCS5D01G411100.1	Wheat	mitochondrion	56.98	60.29
HORVU5Hr1G097400.2	Barley	cytosol, mitochondrion, nucleus, plastid	56.98	58.18
Zm00001d032025_P001	Maize	mitochondrion	23.11	51.01
GSMUA_Achr10P...	Banana	cytosol	21.74	26.99
GSMUA_AchrUn_...	Banana	cytosol	24.71	26.41
GSMUA_Achr7P25200_001	Banana	cytosol	22.2	26.36
GSMUA_Achr4P02690_001	Banana	cytosol	24.49	26.35
GSMUA_Achr5P20950_001	Banana	cytosol	24.03	25.93
GSMUA_Achr4P15220_001	Banana	cytosol	24.26	25.85
GSMUA_Achr8P27330_001	Banana	cytosol	24.26	25.73
GSMUA_Achr11P...	Banana	cytosol	24.03	25.67
GSMUA_Achr11P...	Banana	cytosol	24.03	25.67
GSMUA_Achr3P31520_001	Banana	cytosol	23.57	25.43
GSMUA_Achr11P...	Banana	cytosol	23.8	25.43
GSMUA_Achr1P12960_001	Banana	cytosol	23.8	25.24
GSMUA_Achr11P...	Banana	cytosol	23.57	25.18
GSMUA_Achr9P06360_001	Banana	plastid	23.57	25.0
GSMUA_Achr3P15420_001	Banana	cytosol, plastid	23.57	24.58
GSMUA_Achr4P16320_001	Banana	cytosol, mitochondrion	23.57	24.35
GSMUA_Achr8P00060_001	Banana	cytosol	24.26	22.51
GSMUA_Achr3P18230_001	Banana	cytosol, mitochondrion	23.57	21.91
GSMUA_Achr5P13650_001	Banana	cytosol	23.11	21.44

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.9.1	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr9G09590_001	EnsemblPlants:GSMUA_Achr9P09590_001	EnsemblPlants:GSMUA_Achr9T09590_001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M0TYW8	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24054	PANTHER:PTHR24054:SF33	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002953266	SEG:seg	:	:	:

Description

Casein kinase II subunit alpha [Source:GMGC_GENE;Acc:GSMUA_Achr9G09590_001]

Coordinates

chr9:+:6238431..6246774

Molecular Weight (calculated)

49900.1 Da

IEP (calculated)

9.339

GRAVY (calculated)

-0.341

Length

437 amino acids

Sequence
(BLAST)

001: MAFGPLGSFS LLSRHLQSLA PLLRLPSPPS PHHLATYCLA GLHWISGAAG QGSAPSRLRP SAVAAVAGAL AQKIGKAVRR PGAPSRARVY ADINVHRPKD
101: YWDYESLTVQ WGEQDDYEVV RKVGRGKYSE VFEGVHATNN EKCIIKILKP VKKKKIKREI KILQNLCGGP NIIKLLDIVR DQQSKTPSLI FEYVNNTDFK
201: HILPTNQHID FPHEKFSLLH TLLHIFDSMI VELYVFACAH LALDYCHSQG IMHRDVKPHN VMIDHQHRKL RLIDWGLAEF YHPGKEYNVR VASRYFKGPE
301: LLVDLQDYDY SLDMWSLGCM FAGMIFRKEP FFYGHDNYDQ LVKIAKVLGT DGLNTYLNKY RLELDPQLEA LVGRHSRKPW TRFINGDNQH LAVPEAVDFV
401: DKLLQYDHQD RPTAKEAMAH AYFIPVRNAE SSSRART

Best Arabidopsis Sequence Match ( AT2G23070.1 )
(BLAST)

001: MALRPCTGFT ISSLRNASAA NNNLFSLLSF SSSSPAKRNL LLSSLQDNLR RFASSASLYR QHLRNQQQQH QQQQQSRVKE KSETLAQKIG KSIRRAGAPS
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ

Arabidopsis Description

CKA4Casein kinase II subunit alpha-4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64816]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.