Factsheet for Bra039942.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra006747.1-P
Bra008513.1-P
Bra017213.1-P
Bra020357.1-P
Bra021534.1-P
Bra021536.1-P
Bra032182.1-P
Bra039942.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23070.1	Bra008513.1-P	AT1G64860.1	22111690
AT2G23070.1	Bra032182.1-P	AT2G23070.1	22111690
AT2G23070.1	Bra039942.1-P	AT2G23070.1	22111690
AT2G23070.1	Bra017213.1-P	AT2G36990.1	22111690
AT2G23070.1	Bra021534.1-P	AT3G14180.1	21798944
AT2G23070.1	Bra021536.1-P	AT3G14180.1	21798944
AT2G23070.1	Bra006747.1-P	AT5G58720.1	21798944
AT2G23070.1	Bra020357.1-P	AT5G58720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49445	Canola	plastid	99.29	99.05
CDX76880	Canola	cytosol, mitochondrion	81.67	98.85
Bra032182.1-P	Field mustard	plastid	89.29	93.52
KRH04448	Soybean	nucleus	75.48	91.35
AT2G23070.1	Thale cress	plastid	92.38	89.81
Bra029986.1-P	Field mustard	cytosol	66.9	85.41
KRH58076	Soybean	endoplasmic reticulum	74.76	80.1
KRH58078	Soybean	cytosol	3.57	78.95
VIT_07s0129g00270.t01	Wine grape	mitochondrion	79.52	78.77
Solyc02g064700.2.1	Tomato	plastid	80.0	78.69
HORVU4Hr1G030100.1	Barley	cytosol	16.67	76.09
GSMUA_Achr6P34710_001	Banana	golgi, plasma membrane, vacuole	72.38	75.43
Bra036044.1-P	Field mustard	plasma membrane	68.33	73.78
Bra036806.1-P	Field mustard	cytosol	58.1	72.4
GSMUA_Achr9P09590_001	Banana	mitochondrion, plastid	71.43	68.65
Bra031829.1-P	Field mustard	cytosol	44.05	67.52
KXG37490	Sorghum	mitochondrion	65.48	66.91
Os03t0763000-01	Rice	plastid	64.52	66.42
Zm00001d034137_P001	Maize	plastid	60.95	65.31
TraesCS5B01G405700.1	Wheat	mitochondrion, plastid	63.33	64.41
TraesCS5A01G400900.1	Wheat	mitochondrion, plastid	62.86	64.08
TraesCS5D01G411100.1	Wheat	mitochondrion	62.62	63.68
HORVU5Hr1G097400.2	Barley	cytosol, mitochondrion, nucleus, plastid	62.86	61.68
Zm00001d032025_P001	Maize	mitochondrion	28.57	60.61
Bra006263.1-P	Field mustard	cytosol	25.48	26.1
Bra009916.1-P	Field mustard	cytosol	24.76	25.81
Bra020994.1-P	Field mustard	cytosol	23.33	25.79
Bra036593.1-P	Field mustard	cytosol	24.76	25.62
Bra013341.1-P	Field mustard	cytosol	22.62	25.4
Bra012581.1-P	Field mustard	cytosol	22.62	25.4
Bra001169.1-P	Field mustard	cytosol	24.76	25.37
Bra039407.1-P	Field mustard	cytosol	24.76	25.37
Bra021685.1-P	Field mustard	cytosol	24.52	25.12
Bra019983.1-P	Field mustard	cytosol	24.05	24.22
Bra040251.1-P	Field mustard	cytosol	21.9	23.83
Bra018285.1-P	Field mustard	cytosol	20.0	23.8
Bra030803.1-P	Field mustard	plastid	23.81	23.75
Bra000961.1-P	Field mustard	cytosol, mitochondrion	25.48	22.86
Bra037354.1-P	Field mustard	mitochondrion	25.48	22.48
Bra003440.1-P	Field mustard	mitochondrion	22.14	21.53
Bra007577.1-P	Field mustard	mitochondrion	22.38	20.94
Bra006328.1-P	Field mustard	cytosol, nucleus, peroxisome	22.62	16.73

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.9.1	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra039942	EnsemblPlants:Bra039942.1	EnsemblPlants:Bra039942.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4FFR8
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24054	PANTHER:PTHR24054:SF33
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002542EE2
SEG:seg	:	:	:	:	:

Description

AT2G23070 (E=8e-197) | casein kinase II alpha chain, putative

Coordinates

chrA09:+:31671542..31674169

Molecular Weight (calculated)

48592.2 Da

IEP (calculated)

9.850

GRAVY (calculated)

-0.540

Length

420 amino acids

Sequence
(BLAST)

001: MAFRPYGFTI SSSLRNASAA NGRLFSFLST SPSSSSKNLL SSLRGFASSA SLYRQHLRHQ QQSRAKGLDK PETMAQKIGK SIRRAGAPSK ARVYADVNVV
101: RPKEYWDYES LAVQWGVQDD YEVVRKVGRG KYSEVFEGIH ATDDEKCVIK ILKPVKKKKI KREIKILQNL CGGPNIVKLL DIVRDQQSKT PSLIFEHVNN
201: KDFKVLYPTL SDYDVRYYIY ELLKALDFCH SRGIMHRDVK PHNVMIDHEQ RKLRLIDWGL AEFYHPGKEY NVRVASRYFK GPELLVDLQD YDYSLDLWSL
301: GCMFAGMIFR KEPFFYGHDN YDQLVKIAKV LGTDELNTYL TRYRIELDPN LASLVGRHSR KPWSKFINSE NQHLAVPEAV DFVDKLLKYD HQERPTAKEA
401: MAHPYFYPIR NAESSRTTRG

Best Arabidopsis Sequence Match ( AT2G23070.1 )
(BLAST)

001: MALRPCTGFT ISSLRNASAA NNNLFSLLSF SSSSPAKRNL LLSSLQDNLR RFASSASLYR QHLRNQQQQH QQQQQSRVKE KSETLAQKIG KSIRRAGAPS
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ

Arabidopsis Description

CKA4Casein kinase II subunit alpha-4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64816]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.