Factsheet for Bra036806.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003407.1-P
Bra007520.1-P
Bra022101.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G67380.1	Bra003407.1-P	AT3G60250.1	10535927
AT5G67380.1	Bra007520.1-P	AT3G60250.1	10535927
AT5G67380.1	Bra022101.1-P	AT5G47080.1	10535927

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031829.1-P	Field mustard	cytosol	75.37	92.7
CDY70654	Canola	cytosol	43.32	84.88
Bra029986.1-P	Field mustard	cytosol	80.42	82.37
GSMUA_Achr6P16850_001	Banana	cytosol	80.42	81.38
Solyc02g092640.2.1	Tomato	cytosol, nucleus	80.42	81.38
PGSC0003DMT400064191	Potato	cytosol	80.42	81.38
Solyc03g044140.2.1	Tomato	cytosol, nucleus	80.12	81.08
KRH28388	Soybean	cytosol	79.82	80.78
KRH77093	Soybean	nucleus	79.53	80.48
Os07t0114400-01	Rice	plasma membrane	79.53	80.48
EER97857	Sorghum	cytosol	79.23	80.42
HORVU2Hr1G063420.1	Barley	cytosol	79.23	80.18
TraesCS2D01G260500.1	Wheat	cytosol	79.23	80.18
GSMUA_Achr5P01690_001	Banana	cytosol	78.64	79.58
GSMUA_Achr10P...	Banana	cytosol	78.64	79.58
Zm00001d007951_P001	Maize	cytosol, nucleus	77.74	78.92
TraesCS2A01G263400.1	Wheat	cytosol, nucleus	79.23	78.07
TraesCS4B01G254800.1	Wheat	cytosol	73.59	75.38
TraesCS4A01G049900.1	Wheat	cytosol	73.89	75.0
Os03t0207300-01	Rice	cytosol	73.89	75.0
HORVU4Hr1G069390.1	Barley	cytosol	73.59	74.7
TraesCS4D01G254600.1	Wheat	cytosol	73.29	74.4
Bra036044.1-P	Field mustard	plasma membrane	81.31	70.44
TraesCS5A01G400100.1	Wheat	cytosol, mitochondrion	78.93	69.82
TraesCS5D01G410000.1	Wheat	plastid	78.93	69.82
HORVU5Hr1G097230.1	Barley	cytosol, plastid	78.93	69.63
TraesCS5B01G404900.1	Wheat	cytosol, mitochondrion	78.64	69.55
EER90840	Sorghum	plastid	78.93	69.09
AT5G67380.1	Thale cress	golgi, plasma membrane	83.68	68.95
Zm00001d034125_P002	Maize	mitochondrion, plastid	78.64	68.83
Zm00001d013217_P001	Maize	cytosol	77.74	68.41
KRH04471	Soybean	nucleus	80.12	67.84
Zm00001d018669_P004	Maize	cytosol	75.07	67.29
VIT_07s0129g00410.t01	Wine grape	golgi, plasma membrane	79.82	66.42
TraesCS2B01G278700.2	Wheat	cytosol	73.89	65.87
KRH58068	Soybean	mitochondrion	80.12	65.69
Bra032182.1-P	Field mustard	plastid	70.92	59.6
CDY71648	Canola	plastid	28.19	59.01
Bra039942.1-P	Field mustard	plastid	72.4	58.1
Os03t0762000-01	Rice	plastid	22.85	53.1
Bra013341.1-P	Field mustard	cytosol	26.71	24.06
Bra012581.1-P	Field mustard	cytosol	26.71	24.06
Bra020994.1-P	Field mustard	cytosol	27.0	23.95
Bra021685.1-P	Field mustard	cytosol	28.49	23.41
Bra006263.1-P	Field mustard	cytosol	28.49	23.41
Bra009916.1-P	Field mustard	cytosol	27.3	22.83
Bra018285.1-P	Field mustard	cytosol	23.74	22.66
Bra036593.1-P	Field mustard	cytosol	27.3	22.66
Bra001169.1-P	Field mustard	cytosol	27.3	22.44
Bra039407.1-P	Field mustard	cytosol	27.0	22.2
Bra019983.1-P	Field mustard	cytosol	27.0	21.82
Bra030803.1-P	Field mustard	plastid	26.41	21.14
Bra003440.1-P	Field mustard	mitochondrion	26.71	20.83
Bra000961.1-P	Field mustard	cytosol, mitochondrion	28.78	20.73
Bra040251.1-P	Field mustard	cytosol	23.74	20.73
Bra037354.1-P	Field mustard	mitochondrion	28.49	20.17
Bra007577.1-P	Field mustard	mitochondrion	26.41	19.82
Bra006328.1-P	Field mustard	cytosol, nucleus, peroxisome	25.82	15.32

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.9.1	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra036806	EnsemblPlants:Bra036806.1	EnsemblPlants:Bra036806.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4F6U6	PFAM:PF00069
ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR24054	PANTHER:PTHR24054:SF33	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112	UniParc:UPI0002542CD2	SEG:seg	:	:	:

Description

AT3G50000 (E=1e-063) CKA2, ATCKA2 | CKA2 (CASEIN KINASE II, ALPHA CHAIN 2); kinase

Coordinates

chrA09:+:25668122..25671007

Molecular Weight (calculated)

39678.5 Da

IEP (calculated)

8.829

GRAVY (calculated)

-0.383

Length

337 amino acids

Sequence
(BLAST)

001: MSKARVYTNV NVVRSKDYWD YESLNVQWGE QDDYEVVRKV GRGKYSEVFD GFNVNTKEKS IIKILKPVKK KKIRREIKIL QNLCGGPNIV KLFDVVRDQQ
101: HSKTTILIFE YVNSTDFKVL YPTLTDYDIR YYIYELLKAL DYCHSQGIMH RDIGLAEFYH PGKEYNVRVA SRYFKGPELL VDLQDYDYSL DMWSIGCMFA
201: GMIFRKEPFF YGHDNQDQLV KIAKVLGTDE LNAYLDKHSR KPWSKFINAD NQHLVSPEAI DFLDKLLWYD HQDRLTAKEA MVRSLANINT KKVHFLTFLF
301: QSHFEANSFF FFVGLMTQAH AYFAQVRAAE TSRMISQ

Best Arabidopsis Sequence Match ( AT5G67380.1 )
(BLAST)

001: MIDTLFFLFF LFFDSPLRRL LLLCAVLALR APTAHSPILR SSIVTPTARA VSEVSGCTTI DPDFLVEISD SNQTRAMSKA RVYTEVNVIR PKDYWDYESL
101: IVQWGEQDDY EVVRKVGRGK YSEVFEGINV NSKEKCIIKI LKPVKKKKIR REIKILQNLC GGPNIVKLLD VVRDQHSKTP SLIFEYVNST DFKVLYPTLT
201: DYDIRYYIYE LLKALDFCHS QGIMHRDVKP HNVMIDHELR KLRLIDWGLA EFYHPGKEYN VRVASRYFKG PELLVDLQDY DYSLDMWSLG CMFAGMIFRK
301: EPFFYGHDNQ DQLVKIAKVL GTDELNAYLN KYQLELDPQL EALVGRHSRK PWSKFINADN QHLVSPEAID FLDKLLRYDH QDRLTAKEAM AHAYFAQVRA
401: AETSRMRSQ

Arabidopsis Description

CKA1Casein kinase II subunit alpha-1 [Source:UniProtKB/Swiss-Prot;Acc:Q08467]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.