Factsheet for Os07t0114400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611
nucleus: 19621931
cytosol: 19685898
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19685898 doi

KA Doroshenk, AJ Crofts, RT Morris, JJ Wyrick, TW Okita

Institute of Biological Chemistry, Washington State University, Pullman, Washington 99164-6340, USA.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os07t0495100-01
Os07t0687200-02
Os08t0157600-01
Os10t0564900-01
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23080.1	Os01t0267900-01	AT2G41090.1	17360592
AT2G23080.1	Os01t0279300-01	AT2G41090.1	17360592
AT2G23080.1	Os01t0810300-01	AT2G41090.1	17360592
AT2G23080.1	Os03t0319300-01	AT2G41090.1	17360592
AT2G23080.1	Os05t0491000-01	AT2G41090.1	17360592
AT2G23080.1	Os05t0491100-01	AT2G41090.1	17360592
AT2G23080.1	Os07t0687200-02	AT2G41090.1	17360592
AT2G23080.1	Os12t0603800-00	AT2G41090.1	17360592
AT2G23080.1	Os01t0267900-01	AT2G41100.1	17360592
AT2G23080.1	Os01t0279300-01	AT2G41100.1	17360592
AT2G23080.1	Os01t0810300-01	AT2G41100.1	17360592
AT2G23080.1	Os03t0319300-01	AT2G41100.1	17360592
AT2G23080.1	Os05t0491000-01	AT2G41100.1	17360592
AT2G23080.1	Os05t0491100-01	AT2G41100.1	17360592
AT2G23080.1	Os07t0687200-02	AT2G41100.1	17360592
AT2G23080.1	Os12t0603800-00	AT2G41100.1	17360592
AT2G23080.1	Os03t0743500-02	AT4G14640.1	17360592
AT2G23080.1	Os01t0267900-01	AT5G21274.1	17360592
AT2G23080.1	Os01t0279300-01	AT5G21274.1	17360592
AT2G23080.1	Os01t0810300-01	AT5G21274.1	17360592
AT2G23080.1	Os03t0319300-01	AT5G21274.1	17360592
AT2G23080.1	Os05t0491000-01	AT5G21274.1	17360592
AT2G23080.1	Os05t0491100-01	AT5G21274.1	17360592
AT2G23080.1	Os07t0687200-02	AT5G21274.1	17360592
AT2G23080.1	Os12t0603800-00	AT5G21274.1	17360592
AT5G67380.1	Os08t0157600-01	AT2G46830.1	14978263
AT5G67380.1	Os08t0157600-01	AT2G46830.1	9724822
AT5G67380.1	Os07t0495100-01	AT3G60250.1	10535927
AT5G67380.1	Os10t0564900-01	AT3G60250.1	10535927
AT5G67380.1	Os07t0495100-01	AT5G47080.1	10535927
AT5G67380.1	Os10t0564900-01	AT5G47080.1	10535927

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97857	Sorghum	cytosol	98.2	98.49
HORVU2Hr1G063420.1	Barley	cytosol	97.6	97.6
TraesCS2D01G260500.1	Wheat	cytosol	97.6	97.6
Zm00001d007951_P001	Maize	cytosol, nucleus	96.7	96.99
GSMUA_Achr5P01690_001	Banana	cytosol	95.5	95.5
KRH28388	Soybean	cytosol	95.2	95.2
Solyc03g044140.2.1	Tomato	cytosol, nucleus	95.2	95.2
TraesCS2A01G263400.1	Wheat	cytosol, nucleus	97.6	95.03
KRH77093	Soybean	nucleus	94.89	94.89
PGSC0003DMT400064191	Potato	cytosol	93.99	93.99
Solyc02g092640.2.1	Tomato	cytosol, nucleus	93.69	93.69
CDY30613	Canola	cytosol	93.09	93.09
CDY57359	Canola	cytosol	92.79	93.07
CDX83104	Canola	cytosol	91.89	93.01
Bra029986.1-P	Field mustard	cytosol	91.89	93.01
CDY57680	Canola	cytosol	92.79	92.79
VIT_18s0001g09320.t01	Wine grape	cytosol	92.49	92.49
CDY70654	Canola	cytosol	47.15	91.28
AT2G23080.1	Thale cress	cytosol	90.39	90.39
Os03t0207300-01	Rice	cytosol	89.49	89.76
Zm00001d018669_P004	Maize	cytosol	92.79	82.18
TraesCS2B01G278700.2	Wheat	cytosol	90.99	80.16
CDX98044	Canola	cytosol	38.44	80.0
KRH04471	Soybean	nucleus	95.5	79.9
Bra036044.1-P	Field mustard	plasma membrane	93.09	79.69
Bra036806.1-P	Field mustard	cytosol	80.48	79.53
VIT_07s0129g00410.t01	Wine grape	golgi, plasma membrane	94.89	78.02
KRH58068	Soybean	mitochondrion	95.5	77.37
AT3G50000.1	Thale cress	golgi, plasma membrane, vacuole	93.39	77.17
AT5G67380.1	Thale cress	golgi, plasma membrane	93.39	76.04
Bra031829.1-P	Field mustard	cytosol	60.96	74.09
CDY71648	Canola	plastid	31.53	65.22
CDY67469	Canola	vacuole	56.76	64.51
CDY15289	Canola	vacuole	51.95	62.68
Os03t0763000-01	Rice	plastid	76.28	62.25
Os03t0762000-01	Rice	plastid	26.73	61.38
CDY29766	Canola	golgi, plasma membrane	65.17	61.3
CDY25489	Canola	golgi, plasma membrane	58.26	39.92
Os01t0205700-01	Rice	cytosol	22.82	32.62
Os05t0207500-01	Rice	cytosol	33.03	27.36
Os01t0252100-02	Rice	cytosol, plasma membrane	32.13	26.23
Os02t0236200-01	Rice	cytosol	30.63	25.44
Os03t0841800-01	Rice	mitochondrion	32.13	25.24
Os05t0134000-03	Rice	cytosol	30.63	24.82
Os06t0547900-02	Rice	cytosol	30.03	24.81
Os01t0296100-01	Rice	cytosol	30.33	24.75
Os10t0521700-01	Rice	cytosol, mitochondrion	31.83	22.6
Os01t0252200-01	Rice	nucleus	8.11	16.17

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.9.1	Gene3D:3.30.200.20	EntrezGene:4342248	ProteinID:BAC16172.1	ProteinID:BAF20666.1
ProteinID:BAS99792.1	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009628	GO:GO:0009648	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0010229
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os07g0114400	EnsemblPlants:Os07t0114400-01	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24054	PANTHER:PTHR24054:SF33	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
UniProt:Q8H386	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00000AD85A	RefSeq:XP_015646887.1
SEG:seg	:	:	:	:	:

Description

casein kinase II-alpha, CK2alpha subunit 2Casein kinase II alpha subunit. (Os07t0114400-01)

Coordinates

chr7:-:799617..805177

Molecular Weight (calculated)

39344.3 Da

IEP (calculated)

8.700

GRAVY (calculated)

-0.534

Length

333 amino acids

Sequence
(BLAST)

001: MSKARVYTDV NVLRPKEYWD YEALTVQWGE QDDYEVVRKV GRGKYSEVFE GINVNNNEKC IIKILKPVKK KKIKREIKIL QNLCGGPNIV KLLDIVRDQH
101: SKTPSLIFEY VNNTDFKVLY PTLTDYDIRY YIYELLKALD YCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYHPG KEYNVRVASR YFKGPELLVD
201: LQDYDYSLDM WSLGCMFAGM IFRKEPFFYG HDNHDQLVKI AKVLGTDSLN SYLNKYRIEL DPQLEALVGR HSRKPWSKFI NADNQHLVSP EAIDFLDKLL
301: RYDHQDRLTA REAMAHPYFL QVRAAENSRP RAQ

Best Arabidopsis Sequence Match ( AT5G67380.1 )
(BLAST)

001: MIDTLFFLFF LFFDSPLRRL LLLCAVLALR APTAHSPILR SSIVTPTARA VSEVSGCTTI DPDFLVEISD SNQTRAMSKA RVYTEVNVIR PKDYWDYESL
101: IVQWGEQDDY EVVRKVGRGK YSEVFEGINV NSKEKCIIKI LKPVKKKKIR REIKILQNLC GGPNIVKLLD VVRDQHSKTP SLIFEYVNST DFKVLYPTLT
201: DYDIRYYIYE LLKALDFCHS QGIMHRDVKP HNVMIDHELR KLRLIDWGLA EFYHPGKEYN VRVASRYFKG PELLVDLQDY DYSLDMWSLG CMFAGMIFRK
301: EPFFYGHDNQ DQLVKIAKVL GTDELNAYLN KYQLELDPQL EALVGRHSRK PWSKFINADN QHLVSPEAID FLDKLLRYDH QDRLTAKEAM AHAYFAQVRA
401: AETSRMRSQ

Arabidopsis Description

CKA1Casein kinase II subunit alpha-1 [Source:UniProtKB/Swiss-Prot;Acc:Q08467]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.