Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g092640.2.1 | Tomato | cytosol, nucleus | 99.7 | 99.7 |
| KRH28388 | Soybean | cytosol | 95.5 | 95.5 |
| KRH77093 | Soybean | nucleus | 95.2 | 95.2 |
| Bra029986.1-P | Field mustard | cytosol | 93.39 | 94.53 |
| CDX83104 | Canola | cytosol | 93.39 | 94.53 |
| CDY57680 | Canola | cytosol | 94.29 | 94.29 |
| CDY30613 | Canola | cytosol | 94.29 | 94.29 |
| CDY57359 | Canola | cytosol | 93.99 | 94.28 |
| CDY70654 | Canola | cytosol | 48.65 | 94.19 |
| Os07t0114400-01 | Rice | plasma membrane | 93.99 | 93.99 |
| GSMUA_Achr6P16850_001 | Banana | cytosol | 93.99 | 93.99 |
| EER97857 | Sorghum | cytosol | 93.69 | 93.98 |
| GSMUA_Achr5P01690_001 | Banana | cytosol | 93.39 | 93.39 |
| GSMUA_Achr10P... | Banana | cytosol | 93.09 | 93.09 |
| HORVU2Hr1G063420.1 | Barley | cytosol | 92.79 | 92.79 |
| TraesCS2D01G260500.1 | Wheat | cytosol | 92.79 | 92.79 |
| Zm00001d007951_P001 | Maize | cytosol, nucleus | 92.49 | 92.77 |
| TraesCS2A01G263400.1 | Wheat | cytosol, nucleus | 92.79 | 90.35 |
| AT2G23080.1 | Thale cress | cytosol | 89.79 | 89.79 |
| Os03t0207300-01 | Rice | cytosol | 87.39 | 87.65 |
| TraesCS4A01G049900.1 | Wheat | cytosol | 86.19 | 86.45 |
| TraesCS4D01G254600.1 | Wheat | cytosol | 86.19 | 86.45 |
| TraesCS4B01G254800.1 | Wheat | cytosol | 85.29 | 86.32 |
| HORVU4Hr1G069390.1 | Barley | cytosol | 85.89 | 86.14 |
| EER90840 | Sorghum | plastid | 93.39 | 80.78 |
| Bra036044.1-P | Field mustard | plasma membrane | 94.29 | 80.72 |
| CDX98044 | Canola | cytosol | 38.74 | 80.62 |
| Bra036806.1-P | Field mustard | cytosol | 81.38 | 80.42 |
| Zm00001d034125_P002 | Maize | mitochondrion, plastid | 92.79 | 80.26 |
| Zm00001d013217_P001 | Maize | cytosol | 92.19 | 80.16 |
| KRH04471 | Soybean | nucleus | 95.8 | 80.15 |
| TraesCS5A01G400100.1 | Wheat | cytosol, mitochondrion | 91.59 | 80.05 |
| TraesCS5D01G410000.1 | Wheat | plastid | 91.59 | 80.05 |
| HORVU5Hr1G097230.1 | Barley | cytosol, plastid | 91.59 | 79.84 |
| TraesCS5B01G404900.1 | Wheat | cytosol, mitochondrion | 91.29 | 79.79 |
| Zm00001d018669_P004 | Maize | cytosol | 88.89 | 78.72 |
| AT3G50000.1 | Thale cress | golgi, plasma membrane, vacuole | 94.59 | 78.16 |
| VIT_07s0129g00410.t01 | Wine grape | golgi, plasma membrane | 94.89 | 78.02 |
| KRH58068 | Soybean | mitochondrion | 95.8 | 77.62 |
| AT5G67380.1 | Thale cress | golgi, plasma membrane | 94.59 | 77.02 |
| TraesCS2B01G278700.2 | Wheat | cytosol | 87.39 | 76.98 |
| Bra031829.1-P | Field mustard | cytosol | 61.86 | 75.18 |
| CDY71648 | Canola | plastid | 32.73 | 67.7 |
| CDY67469 | Canola | vacuole | 57.66 | 65.53 |
| CDY15289 | Canola | vacuole | 52.55 | 63.41 |
| CDY29766 | Canola | golgi, plasma membrane | 65.77 | 61.86 |
| Os03t0762000-01 | Rice | plastid | 25.23 | 57.93 |
| CDY25489 | Canola | golgi, plasma membrane | 58.86 | 40.33 |
| PGSC0003DMT400073091 | Potato | cytosol | 30.63 | 26.7 |
| PGSC0003DMT400080607 | Potato | cytosol | 32.13 | 26.1 |
| PGSC0003DMT400068764 | Potato | cytosol | 29.73 | 25.92 |
| PGSC0003DMT400001392 | Potato | cytosol | 31.83 | 25.85 |
| PGSC0003DMT400007088 | Potato | cytosol | 31.23 | 25.43 |
| PGSC0003DMT400064027 | Potato | cytosol | 28.83 | 25.07 |
| PGSC0003DMT400052647 | Potato | cytosol | 31.23 | 23.96 |
| PGSC0003DMT400017984 | Potato | cytosol, mitochondrion | 30.63 | 21.94 |
| PGSC0003DMT400071378 | Potato | cytosol, mitochondrion | 31.23 | 21.89 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:102594048 | MapMan:18.4.3.9.1 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | UniProt:M1CBW4 | PFAM:PF00069 | EnsemblPlantsGene:PGSC0003DMG400024939 |
| PGSC:PGSC0003DMG400024939 | EnsemblPlants:PGSC0003DMT400064191 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24054 |
| PANTHER:PTHR24054:SF33 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI000295F923 | RefSeq:XP_006339820.1 | SEG:seg | : | : | : |
Description
Protein kinase CK2 alpha subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400024939]
Coordinates
chr2:+:43071774..43081557
Molecular Weight (calculated)
39333.3 Da
IEP (calculated)
8.494
GRAVY (calculated)
-0.535
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKARVYTDI NVLRPREYWD YESLTVQWGD QDDYEVVRKV GRGKYSEVFE GINVNSNEKC IIKILKPVKK KKIKREIKIL QNLCGGPNIV KLLDIVRDQH
101: SKTPSLIFEY VNSTDFKVLY PTLTDYDIRY YIYELLKALD YCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYHPG KEYNVRVASR YFKGPELLVD
201: LQDYDYSLDM WSLGCMFAGM IFRKEPFFYG HDNQDQLVKI AKVLGTDELN AYLHKYQLEL DPQLEAMVGR HSRKPWSKFI NADNQHLVSP EAIDYLDKLL
301: RYDHQTRLTA KEAMAHPYFG QVRAAETSRM RTQ
101: SKTPSLIFEY VNSTDFKVLY PTLTDYDIRY YIYELLKALD YCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYHPG KEYNVRVASR YFKGPELLVD
201: LQDYDYSLDM WSLGCMFAGM IFRKEPFFYG HDNQDQLVKI AKVLGTDELN AYLHKYQLEL DPQLEAMVGR HSRKPWSKFI NADNQHLVSP EAIDYLDKLL
301: RYDHQTRLTA KEAMAHPYFG QVRAAETSRM RTQ
001: MIDTLFFLFF LFFDSPLRRL LLLCAVLALR APTAHSPILR SSIVTPTARA VSEVSGCTTI DPDFLVEISD SNQTRAMSKA RVYTEVNVIR PKDYWDYESL
101: IVQWGEQDDY EVVRKVGRGK YSEVFEGINV NSKEKCIIKI LKPVKKKKIR REIKILQNLC GGPNIVKLLD VVRDQHSKTP SLIFEYVNST DFKVLYPTLT
201: DYDIRYYIYE LLKALDFCHS QGIMHRDVKP HNVMIDHELR KLRLIDWGLA EFYHPGKEYN VRVASRYFKG PELLVDLQDY DYSLDMWSLG CMFAGMIFRK
301: EPFFYGHDNQ DQLVKIAKVL GTDELNAYLN KYQLELDPQL EALVGRHSRK PWSKFINADN QHLVSPEAID FLDKLLRYDH QDRLTAKEAM AHAYFAQVRA
401: AETSRMRSQ
101: IVQWGEQDDY EVVRKVGRGK YSEVFEGINV NSKEKCIIKI LKPVKKKKIR REIKILQNLC GGPNIVKLLD VVRDQHSKTP SLIFEYVNST DFKVLYPTLT
201: DYDIRYYIYE LLKALDFCHS QGIMHRDVKP HNVMIDHELR KLRLIDWGLA EFYHPGKEYN VRVASRYFKG PELLVDLQDY DYSLDMWSLG CMFAGMIFRK
301: EPFFYGHDNQ DQLVKIAKVL GTDELNAYLN KYQLELDPQL EALVGRHSRK PWSKFINADN QHLVSPEAID FLDKLLRYDH QDRLTAKEAM AHAYFAQVRA
401: AETSRMRSQ
Arabidopsis Description
CKA1Casein kinase II subunit alpha-1 [Source:UniProtKB/Swiss-Prot;Acc:Q08467]
SUBAcon: [plasma membrane,golgi]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.