Factsheet for PGSC0003DMT400080607

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g062870.1.1	Tomato	cytosol	99.76	99.76
VIT_14s0066g01050.t01	Wine grape	cytosol	89.76	89.32
PGSC0003DMT400001392	Potato	cytosol	88.78	88.78
CDX70574	Canola	cytosol	87.8	88.02
Bra006263.1-P	Field mustard	cytosol	87.8	87.8
CDX78587	Canola	cytosol	87.56	87.56
AT5G14640.1	Thale cress	cytosol	86.59	86.59
PGSC0003DMT400007088	Potato	cytosol	83.66	83.86
PGSC0003DMT400073091	Potato	cytosol	72.2	77.49
PGSC0003DMT400068764	Potato	cytosol	70.98	76.18
PGSC0003DMT400052647	Potato	cytosol	75.12	70.97
PGSC0003DMT400064027	Potato	cytosol	66.1	70.76
PGSC0003DMT400071378	Potato	cytosol, mitochondrion	77.07	66.53
PGSC0003DMT400017984	Potato	cytosol, mitochondrion	73.9	65.16
CDX78658	Canola	cytosol, nucleus, peroxisome	76.34	55.11
Bra006328.1-P	Field mustard	cytosol, nucleus, peroxisome	76.34	55.11
PGSC0003DMT400064191	Potato	cytosol	26.1	32.13

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102578618	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1D3Q8	PFAM:PF00069
EnsemblPlantsGene:PGSC0003DMG400031389	PGSC:PGSC0003DMG400031389	EnsemblPlants:PGSC0003DMT400080607	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24057	PANTHER:PTHR24057:SF36	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296CB15	RefSeq:XP_006364003.1	RefSeq:XP_006364004.1	RefSeq:XP_015159209.1	:

Description

Petunia Shaggy kinase 4 [Source:PGSC_GENE;Acc:PGSC0003DMG400031389]

Coordinates

chr12:+:20394456..20402826

Molecular Weight (calculated)

46464.6 Da

IEP (calculated)

8.518

GRAVY (calculated)

-0.271

Length

410 amino acids

Sequence
(BLAST)

001: MASGCIMPSA GGKPQTDAML VDKLPEEINE MKIRDDKAEK EMEAAVVDGN GTEKGHIIVT TIGGKNGEPK QTISYMAERV VGQGSFGIVF QAKCLETGET
101: VAIKKVLQDK RYKNRELQTI RLLDHPNVVS LRHCFFSTTE KDELYLNLVL EYVPETVYRV LRHYSKANQR MPMIYVKLYT YQIFRALAYI HGIGVCHRDI
201: KPQNLLVNPH THQLKLCDFG SAKVLVKGEP NISYICSRYY RAPELIFGAT EYTFAIDIWS VGCVLAELLL GQPLFPGESG VDQLVEIIKV LGTPTREEIK
301: CMNPNYTEFK FPQIKAHPWH KIFHKRMPPE AVDLVSRLLQ YSPNLRSTAL EACTHSFFDE LRDPKTRLPN GRPLPPLFNF RPQELKGASA ELLNKLIPEH
401: AKKQCTSLGF

Best Arabidopsis Sequence Match ( AT5G14640.1 )
(BLAST)

001: MASVGTLPAS SMATKQSNAS ICAEKLPEGI NEMKIKDDKE MEAAVVDGNG TETGHIIVTT IGGKNGQPKQ TISYMAERIV GQGSFGIVFQ AKCLETGETV
101: AIKKVLQDKR YKNRELQTMR LLDHPNVVSL KHCFFSTTEK DELYLNLVLE YVPETVYRVS KHYSRANQRM PIIYVKLYTY QICRALAYIH GGVGVCHRDI
201: KPQNLLVNPH THQVKLCDFG SAKVLVKGEP NISYICSRYY RAPELIFGAT EYTTTIDIWS AGCVLAELLL GQPLFPGESG VDQLVEIIKV LGTPTREEIK
301: CMNPNYTEFK FPQIKAHPWH KIFHKRTPPE AVDLVSRLLQ YSPNLRSTAM EAIVHPFFDE LRDPNTRLPN GRALPPLFNF KPQELKGASL ELLSKLIPDH
401: ARKQCSFLAL

Arabidopsis Description

ASK5Shaggy-related protein kinase epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8VZD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.