Factsheet for Solyc12g062870.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400080607	Potato	cytosol	99.76	99.76
VIT_14s0066g01050.t01	Wine grape	cytosol	89.76	89.32
Solyc02g086670.2.1	Tomato	cytosol	87.56	88.86
CDX70574	Canola	cytosol	87.8	88.02
Bra006263.1-P	Field mustard	cytosol	87.8	87.8
CDX78587	Canola	cytosol	87.56	87.56
AT5G14640.1	Thale cress	cytosol	86.59	86.59
Solyc01g101000.2.1	Tomato	cytosol	83.9	84.11
Solyc02g072300.2.1	Tomato	cytosol	72.2	77.49
Solyc03g006070.2.1	Tomato	cytosol	70.98	76.18
Solyc01g103430.2.1	Tomato	cytosol	72.93	70.85
Solyc07g055200.2.1	Tomato	cytosol	75.12	70.48
Solyc06g082640.2.1	Tomato	cytosol	38.05	69.33
Solyc01g091620.2.1	Tomato	cytosol, mitochondrion	76.83	66.32
Solyc05g051050.2.1	Tomato	cytosol, mitochondrion	72.68	63.95
Solyc10g037910.1.1	Tomato	cytosol, plasma membrane	36.59	63.83
Solyc04g025600.1.1	Tomato	cytosol	14.63	56.07
Bra006328.1-P	Field mustard	cytosol, nucleus, peroxisome	76.34	55.11
CDX78658	Canola	cytosol, nucleus, peroxisome	76.34	55.11
Solyc03g044140.2.1	Tomato	cytosol, nucleus	26.59	32.73
Solyc02g092640.2.1	Tomato	cytosol, nucleus	26.1	32.13
Solyc02g064700.2.1	Tomato	plastid	27.07	26.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	UniProt:K4DGB0	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24057	PANTHER:PTHR24057:SF36	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc12g062870.1	EnsemblPlants:Solyc12g062870.1.1	UniParc:UPI000276A515

Description

No Description!

Coordinates

chr12:+:35514113..35519726

Molecular Weight (calculated)

46473.6 Da

IEP (calculated)

8.519

GRAVY (calculated)

-0.270

Length

410 amino acids

Sequence
(BLAST)

001: MASGCIMPSA GGKPHTDAML VDKLPEEINE MKIRDDKAEK EMEAAVVDGN GTEKGHIIVT TIGGKNGEPK QTISYMAERV VGQGSFGIVF QAKCLETGET
101: VAIKKVLQDK RYKNRELQTI RLLDHPNVVS LRHCFFSTTE KDELYLNLVL EYVPETVYRV LRHYSKANQR MPMIYVKLYT YQIFRALAYI HGIGVCHRDI
201: KPQNLLVNPH THQLKLCDFG SAKVLVKGEP NISYICSRYY RAPELIFGAT EYTFAIDIWS VGCVLAELLL GQPLFPGESG VDQLVEIIKV LGTPTREEIK
301: CMNPNYTEFK FPQIKAHPWH KIFHKRMPPE AVDLVSRLLQ YSPNLRSTAL EACTHSFFDE LRDPKTRLPN GRPLPPLFNF RPQELKGASA ELLNKLIPEH
401: AKKQCTSLGF

Best Arabidopsis Sequence Match ( AT5G14640.1 )
(BLAST)

001: MASVGTLPAS SMATKQSNAS ICAEKLPEGI NEMKIKDDKE MEAAVVDGNG TETGHIIVTT IGGKNGQPKQ TISYMAERIV GQGSFGIVFQ AKCLETGETV
101: AIKKVLQDKR YKNRELQTMR LLDHPNVVSL KHCFFSTTEK DELYLNLVLE YVPETVYRVS KHYSRANQRM PIIYVKLYTY QICRALAYIH GGVGVCHRDI
201: KPQNLLVNPH THQVKLCDFG SAKVLVKGEP NISYICSRYY RAPELIFGAT EYTTTIDIWS AGCVLAELLL GQPLFPGESG VDQLVEIIKV LGTPTREEIK
301: CMNPNYTEFK FPQIKAHPWH KIFHKRTPPE AVDLVSRLLQ YSPNLRSTAM EAIVHPFFDE LRDPNTRLPN GRALPPLFNF KPQELKGASL ELLSKLIPDH
401: ARKQCSFLAL

Arabidopsis Description

ASK5Shaggy-related protein kinase epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8VZD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.