Factsheet for Bra006263.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra034424.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14640.1	Bra034424.1-P	AT1G35210.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70574	Canola	cytosol	99.76	100.0
CDX78587	Canola	cytosol	98.54	98.54
AT5G14640.1	Thale cress	cytosol	95.61	95.61
VIT_14s0066g01050.t01	Wine grape	cytosol	89.02	88.59
Solyc12g062870.1.1	Tomato	cytosol	87.8	87.8
PGSC0003DMT400080607	Potato	cytosol	87.8	87.8
Solyc02g086670.2.1	Tomato	cytosol	85.61	86.88
Bra009916.1-P	Field mustard	cytosol	85.37	86.85
PGSC0003DMT400001392	Potato	cytosol	85.85	85.85
Bra036593.1-P	Field mustard	cytosol	84.63	85.47
Bra039407.1-P	Field mustard	cytosol	83.41	83.41
Bra001169.1-P	Field mustard	cytosol	83.41	83.41
Bra013341.1-P	Field mustard	cytosol	73.17	80.21
Bra012581.1-P	Field mustard	cytosol	72.68	79.68
Bra020994.1-P	Field mustard	cytosol	72.93	78.68
Bra040251.1-P	Field mustard	cytosol	73.41	77.98
Bra021685.1-P	Field mustard	cytosol	74.63	74.63
Bra018285.1-P	Field mustard	cytosol	63.17	73.37
Bra030803.1-P	Field mustard	plastid	74.15	72.21
Bra019983.1-P	Field mustard	cytosol	72.68	71.46
Bra000961.1-P	Field mustard	cytosol, mitochondrion	74.88	65.6
Bra003440.1-P	Field mustard	mitochondrion	68.78	65.28
Bra037354.1-P	Field mustard	mitochondrion	75.61	65.13
Bra007577.1-P	Field mustard	mitochondrion	69.02	63.03
Bra006328.1-P	Field mustard	cytosol, nucleus, peroxisome	81.71	58.98
Bra029986.1-P	Field mustard	cytosol	25.61	31.91
Bra036806.1-P	Field mustard	cytosol	23.41	28.49
Bra036044.1-P	Field mustard	plasma membrane	26.59	28.02
Bra031829.1-P	Field mustard	cytosol	18.29	27.37
Bra032182.1-P	Field mustard	plastid	25.37	25.94
Bra039942.1-P	Field mustard	plastid	26.1	25.48

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra006263	EnsemblPlants:Bra006263.1
EnsemblPlants:Bra006263.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0006972	GO:GO:0008150
GO:GO:0008152	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0046777	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4CPX4	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24057	PANTHER:PTHR24057:SF36	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000253FBA9	:

Description

AT5G14640 (E=2e-234) ATSK13, SK13 | SK13 (SHAGGY-LIKE KINASE 13); ATP binding / protein kinase/ protein serine/threonine kinase

Coordinates

chrA03:-:2745619..2748016

Molecular Weight (calculated)

46138.0 Da

IEP (calculated)

8.518

GRAVY (calculated)

-0.258

Length

410 amino acids

Sequence
(BLAST)

001: MASVGTLPSS TTATRKMNDS VCVDKLPEGI NEMKIKDDKE MEAAVVDGNG TETGHIIVTT IGGKDGQPKQ TISYMAERVV GQGSFGIVFQ AKCLETGETV
101: AIKKVLQDKR YKNRELQTMR LLDHPNVVSL KHCFFSTTEK DELYLNLVLE YVPETVYRVS KHYSRANQRM PMIYVKLYTY QICRALAYIH GGVGVCHRDI
201: KPQNLLVNPH THQVKLCDFG SAKVLVKGEP NISYICSRYY RAPELIFGAT EYTTAIDIWS AGCVLAELLL GQPLFPGESG VDQLVEIIKV LGTPTREEIK
301: CMNPNYTEFK FPQIKAHPWH KIFHKRTPPE AVDLASRLLQ YSPNLRSTAM EAIVHPFFDE LRDPNTRLPN GRPLPPLFNF KPQELKGASV ELLSKLIPDH
401: ARKQCSFLAV

Best Arabidopsis Sequence Match ( AT5G14640.1 )
(BLAST)

001: MASVGTLPAS SMATKQSNAS ICAEKLPEGI NEMKIKDDKE MEAAVVDGNG TETGHIIVTT IGGKNGQPKQ TISYMAERIV GQGSFGIVFQ AKCLETGETV
101: AIKKVLQDKR YKNRELQTMR LLDHPNVVSL KHCFFSTTEK DELYLNLVLE YVPETVYRVS KHYSRANQRM PIIYVKLYTY QICRALAYIH GGVGVCHRDI
201: KPQNLLVNPH THQVKLCDFG SAKVLVKGEP NISYICSRYY RAPELIFGAT EYTTTIDIWS AGCVLAELLL GQPLFPGESG VDQLVEIIKV LGTPTREEIK
301: CMNPNYTEFK FPQIKAHPWH KIFHKRTPPE AVDLVSRLLQ YSPNLRSTAM EAIVHPFFDE LRDPNTRLPN GRALPPLFNF KPQELKGASL ELLSKLIPDH
401: ARKQCSFLAL

Arabidopsis Description

ASK5Shaggy-related protein kinase epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8VZD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.