Factsheet for VIT_14s0066g01050.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0060g00600.t01	Wine grape	cytosol	83.5	90.29
VIT_07s0005g02100.t01	Wine grape	cytosol	83.5	90.29
Solyc12g062870.1.1	Tomato	cytosol	89.32	89.76
PGSC0003DMT400080607	Potato	cytosol	89.32	89.76
CDX70574	Canola	cytosol	88.59	89.24
Bra006263.1-P	Field mustard	cytosol	88.59	89.02
CDX78587	Canola	cytosol	88.59	89.02
AT5G14640.1	Thale cress	cytosol	88.59	89.02
PGSC0003DMT400001392	Potato	cytosol	87.62	88.05
Solyc02g086670.2.1	Tomato	cytosol	86.17	87.87
VIT_10s0003g01480.t01	Wine grape	cytosol	74.76	81.05
VIT_15s0045g00420.t01	Wine grape	cytosol	8.01	78.57
VIT_12s0035g01060.t01	Wine grape	cytosol	77.67	75.83
VIT_12s0028g01810.t01	Wine grape	cytosol	73.54	75.37
VIT_15s0048g02010.t01	Wine grape	cytosol, mitochondrion	77.67	68.38
CDX78658	Canola	cytosol, nucleus, peroxisome	76.7	55.63
Bra006328.1-P	Field mustard	cytosol, nucleus, peroxisome	76.7	55.63
VIT_18s0001g09320.t01	Wine grape	cytosol	26.21	32.43
VIT_07s0129g00410.t01	Wine grape	golgi, plasma membrane	26.7	27.16
VIT_07s0129g00270.t01	Wine grape	mitochondrion	27.43	26.65

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100261256	wikigene:100261256	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20
ProteinID:CBI34900	ProteinID:CBI34900.3	UniProt:D7TWM5	EMBL:FN596252	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100261256	wikigene:LOC100261256	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24057	PANTHER:PTHR24057:SF36	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC55627	UniParc:UPI0001BE4562
ArrayExpress:VIT_14s0066g01050	EnsemblPlantsGene:VIT_14s0066g01050	EnsemblPlants:VIT_14s0066g01050.t01	unigene:Vvi.15600	RefSeq:XP_002276754	RefSeq:XP_002276754.2
RefSeq:XP_010660896.1	:	:	:	:	:

Description

No Description!

Coordinates

chr14:-:27493186..27499221

Molecular Weight (calculated)

46598.9 Da

IEP (calculated)

8.458

GRAVY (calculated)

-0.218

Length

412 amino acids

Sequence
(BLAST)

001: MASAGIPPAS AVGKPSGNTM FVDKLPEEIN EMKIRDDKVE KEMEATVVDG NGTETGHIIV TTIGGRNGQP KQTISYMAER VVGQGSFGIV FQAKCLETGE
101: TVAIKKVLQD KRYKNRELQT MRLLDHPNIV SLKHCFFSTT DKDELYLNLV LEYVPETVYR VAKHYSRANQ RMPLIYVKLY TYQICRALAY IHGVVGVCHR
201: DIKPQNLLVN PHIHQLKLCD FGSAKVLVKG EPNISYICSR YYRAPELIFG ATEYTTAIDM WSVGCVLAEL LLGQPLFPGE SGVDQLVEII KVLGTPTREE
301: IKCMNPNYTE FKFPQIKAHP WHKIFHKRMP PEAVDLVSRL LQYSPNLRCT ALEACIHPFF DELRDQNSRL PNGRPLPPLF NFKPQELKGA SLELLAKLIP
401: EHARKQCPFL GF

Best Arabidopsis Sequence Match ( AT5G14640.1 )
(BLAST)

001: MASVGTLPAS SMATKQSNAS ICAEKLPEGI NEMKIKDDKE MEAAVVDGNG TETGHIIVTT IGGKNGQPKQ TISYMAERIV GQGSFGIVFQ AKCLETGETV
101: AIKKVLQDKR YKNRELQTMR LLDHPNVVSL KHCFFSTTEK DELYLNLVLE YVPETVYRVS KHYSRANQRM PIIYVKLYTY QICRALAYIH GGVGVCHRDI
201: KPQNLLVNPH THQVKLCDFG SAKVLVKGEP NISYICSRYY RAPELIFGAT EYTTTIDIWS AGCVLAELLL GQPLFPGESG VDQLVEIIKV LGTPTREEIK
301: CMNPNYTEFK FPQIKAHPWH KIFHKRTPPE AVDLVSRLLQ YSPNLRSTAM EAIVHPFFDE LRDPNTRLPN GRALPPLFNF KPQELKGASL ELLSKLIPDH
401: ARKQCSFLAL

Arabidopsis Description

ASK5Shaggy-related protein kinase epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8VZD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.