Factsheet for VIT_18s0001g09320.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P16850_001	Banana	cytosol	94.89	94.89
GSMUA_Achr5P01690_001	Banana	cytosol	94.59	94.59
GSMUA_Achr10P...	Banana	cytosol	93.39	93.39
EER97857	Sorghum	cytosol	92.79	93.07
HORVU2Hr1G063420.1	Barley	cytosol	92.79	92.79
TraesCS2D01G260500.1	Wheat	cytosol	92.79	92.79
Os07t0114400-01	Rice	plasma membrane	92.49	92.49
Zm00001d007951_P001	Maize	cytosol, nucleus	90.99	91.27
TraesCS2A01G263400.1	Wheat	cytosol, nucleus	92.79	90.35
Os03t0207300-01	Rice	cytosol	89.19	89.46
TraesCS4A01G049900.1	Wheat	cytosol	87.09	87.35
TraesCS4D01G254600.1	Wheat	cytosol	87.09	87.35
TraesCS4B01G254800.1	Wheat	cytosol	86.19	87.23
HORVU4Hr1G069390.1	Barley	cytosol	86.79	87.05
EER90840	Sorghum	plastid	91.59	79.22
TraesCS5D01G410000.1	Wheat	plastid	90.39	79.0
TraesCS5A01G400100.1	Wheat	cytosol, mitochondrion	90.39	79.0
Zm00001d013217_P001	Maize	cytosol	90.69	78.85
HORVU5Hr1G097230.1	Barley	cytosol, plastid	90.39	78.8
VIT_07s0129g00410.t01	Wine grape	golgi, plasma membrane	95.8	78.77
TraesCS5B01G404900.1	Wheat	cytosol, mitochondrion	90.09	78.74
Zm00001d034125_P002	Maize	mitochondrion, plastid	90.99	78.7
Zm00001d018669_P004	Maize	cytosol	87.39	77.39
TraesCS2B01G278700.2	Wheat	cytosol	87.39	76.98
VIT_07s0129g00270.t01	Wine grape	mitochondrion	87.99	69.1
Os03t0762000-01	Rice	plastid	23.72	54.48
VIT_15s0045g00420.t01	Wine grape	cytosol	3.6	28.57
VIT_07s0005g02100.t01	Wine grape	cytosol	31.53	27.56
VIT_10s0003g01480.t01	Wine grape	cytosol	31.23	27.37
VIT_14s0060g00600.t01	Wine grape	cytosol	31.23	27.3
VIT_14s0066g01050.t01	Wine grape	cytosol	32.43	26.21
VIT_12s0028g01810.t01	Wine grape	cytosol	30.63	25.37
VIT_12s0035g01060.t01	Wine grape	cytosol	31.23	24.64
VIT_15s0048g02010.t01	Wine grape	cytosol, mitochondrion	31.83	22.65

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100266111	wikigene:100266111	MapMan:18.4.3.9.1	Gene3D:3.30.200.20	EMBL:AM432994
ProteinID:CAN80358	ProteinID:CAN80358.1	ProteinID:CBI19421	ProteinID:CBI19421.3	UniProt:E0CP43	EMBL:FN595227
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100266111
wikigene:LOC100266111	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24054
PANTHER:PTHR24054:SF33	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TIGR:TC69647	UniParc:UPI00015C7F70	ArrayExpress:VIT_18s0001g09320	EnsemblPlantsGene:VIT_18s0001g09320	EnsemblPlants:VIT_18s0001g09320.t01	unigene:Vvi.2682
RefSeq:XP_002285210	RefSeq:XP_002285210.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr18:+:7813668..7832933

Molecular Weight (calculated)

39502.3 Da

IEP (calculated)

8.276

GRAVY (calculated)

-0.552

Length

333 amino acids

Sequence
(BLAST)

001: MSSARVYADV NIHRPRDYWD YESLTVQWGD QDDYEVVRKV GRGKYSEVFE GINVTNNERC VVKILKPVKK KKIKREIKIL QNLCGGPNIV KLLDIVRDQH
101: SKTPSLIFEY VNSTDFKVLY PTLTDYDIRY YIYELLKALD YCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYHPG KEYNVRVASR YFKGPELLVD
201: LQDYDYSLDM WSLGCMFAGM IFRKEPFFYG HDNHDQLVKI AKVLGTDELN AYLNKYRLEL DPQLDALVGR HSRKPWSRFI NPDNQHLFSP EAIDFLDKLL
301: RYDHQDRLTA REAMAHPYFF QVRTAESSRM RTQ

Best Arabidopsis Sequence Match ( AT3G50000.1 )
(BLAST)

001: MHLIFFFSYF LRRYLLLLCA ILILRAPLAH SLIPPLTCVN TGTVESDVTG IRFDRCLDTD SLAKISLSTV MSKARVYTDV NVIRPKDYWD YESLNVQWGE
101: QDDYEVVRKV GRGKYSEVFE GINMNNNEKC IIKILKPVKK KKIRREIKIL QNLCGGPNIV KLLDVVRDQH SKTPSLIFEY VNSTDFKVLY PTLTDYDIRY
201: YIYELLKALD FCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYHPG KEYNVRVASR YFKGPELLVD LQDYDYSLDM WSLGCMFAGM IFRKEPFFYG
301: HDNQDQLVKI AKVLGTDELN AYLNKYQLEL DTQLEALVGR HSRKPWSKFI NADNRHLVSP EAIDYLDKLL RYDHQDRLTA KEAMAHPYFA QVRAAESSRM
401: RTQ

Arabidopsis Description

CKA2Casein kinase II subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q08466]
SUBAcon: [plasma membrane,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.