Factsheet for VIT_12s0035g01060.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26299	Soybean	cytosol	94.31	94.76
KRH06055	Soybean	cytosol	93.36	93.81
PGSC0003DMT400064027	Potato	cytosol	83.89	92.43
Solyc01g103430.2.1	Tomato	cytosol	92.18	92.18
AT1G09840.7	Thale cress	cytosol, plastid	88.15	88.36
Bra030803.1-P	Field mustard	plastid	87.91	88.12
CDY65729	Canola	plastid	87.91	88.12
Bra019983.1-P	Field mustard	cytosol	86.73	87.77
CDX93471	Canola	cytosol	86.73	87.77
CDX94939	Canola	cytosol	86.73	87.77
CDY31060	Canola	plastid	87.44	87.65
GSMUA_Achr4P16320_001	Banana	cytosol, mitochondrion	86.26	86.05
Os03t0841800-01	Rice	mitochondrion	84.12	83.73
AT1G57870.3	Thale cress	cytosol	86.26	82.17
TraesCS5D01G528400.1	Wheat	cytosol	82.7	81.92
EER90544	Sorghum	cytosol	82.46	81.69
TraesCS5B01G529300.1	Wheat	cytosol	82.46	81.69
VIT_07s0005g02100.t01	Wine grape	cytosol	73.22	81.1
TraesCS4A01G345500.1	Wheat	cytosol	82.23	81.07
TraesCS1A01G407700.5	Wheat	cytosol	81.99	80.84
VIT_14s0060g00600.t01	Wine grape	cytosol	72.51	80.31
VIT_14s0066g01050.t01	Wine grape	cytosol	75.83	77.67
VIT_10s0003g01480.t01	Wine grape	cytosol	64.69	71.84
VIT_15s0045g00420.t01	Wine grape	cytosol	7.11	71.43
VIT_12s0028g01810.t01	Wine grape	cytosol	63.51	66.67
VIT_15s0048g02010.t01	Wine grape	cytosol, mitochondrion	72.04	64.96
Zm00001d012869_P005	Maize	mitochondrion	83.18	32.62
VIT_18s0001g09320.t01	Wine grape	cytosol	24.64	31.23
VIT_07s0129g00410.t01	Wine grape	golgi, plasma membrane	24.64	25.68
VIT_07s0129g00270.t01	Wine grape	mitochondrion	25.12	25.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100252299	wikigene:100252299	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20
ProteinID:CBI29697	ProteinID:CBI29697.3	UniProt:D7TGS5	EMBL:FN595990	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100252299	wikigene:LOC100252299	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24057	PANTHER:PTHR24057:SF35	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC63072	TIGR:TC64279
UniParc:UPI00015CC138	ArrayExpress:VIT_12s0035g01060	EnsemblPlantsGene:VIT_12s0035g01060	EnsemblPlants:VIT_12s0035g01060.t01	unigene:Vvi.510	RefSeq:XP_002263398
RefSeq:XP_002263398.1	RefSeq:XP_010657975.1	RefSeq:XP_010657976.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:-:20814828..20831239

Molecular Weight (calculated)

47881.9 Da

IEP (calculated)

8.295

GRAVY (calculated)

-0.291

Length

422 amino acids

Sequence
(BLAST)

001: MASASLGHGG VGSSRTANGF KGSSSSVDWL GREMLEMRLR DRVDQDDDRD SEPDIIDGVG AEAGHVIRTT FGGRNGQSKQ TVSYIAEHVV GTGSFGVVFQ
101: AKCRETGEIV AIKKVLQDKR YKNRELQIMQ MLDHPNIVAL KHCFFSTTDK EELYLNLVLE FVPETVNRIA RNYSRINQRM PLIYVKLYTY QICRALAYIH
201: NCIGICHRDI KPQNLLVNPH THQLKLCDFG SAKVLVKGEP NVSYICSRYY RAPELIFGAT EYTTAIDIWS TGCVMAELLL GQPLFPGESG VDQLVEIIKV
301: LGTPTREEIK CMNPNYTEFK FPQIKPHPWH KVFQKRLPPE AVDLVCRFFQ YSPNLRCTAL EACIHPFFDE LRDPSTRLPN GRPLPPLFNF KPQELSGIPS
401: DIRTRLIPEH ARKQNLFMAL HT

Best Arabidopsis Sequence Match ( AT1G09840.3 )
(BLAST)

001: MASSGLGNGV GTSRSAKGLK SSSSSVDWLT RDLAETRIRD KVETDDERDS EPDIIDGAGA EPGHVIRTTL RGRNGQSRQT VSYISEHVVG TGSFGMVFQA
101: KCRETGEVVA IKKVLQDKRY KNRELQIMQM LDHPNAVALK HSFFSRTDNE EVYLNLVLEF VPETVNRVAR SYSRTNQLMP LIYVKLYTYQ ICRALAYIHN
201: SFGLCHRDIK PQNLLVNPHT HQLKICDFGS AKVLVKGEPN VSYICSRYYR APELIFGASE YTTAIDIWST GCVMAELLLG QPLFPGESGV DQLVEIIKVL
301: GTPTREEIKC MNPNYTEFKF PQIKPHPWHK VFQKRLPPEA VDLLCRFFQY SPNLRCTALE ACIHPLFDEL RDPNTRLPNG RPLPPLFNFK PQELSGIPPE
401: IVNRLVPEHA RKQNLFMALH S

Arabidopsis Description

ASK10Shaggy-related protein kinase kappa [Source:UniProtKB/Swiss-Prot;Acc:Q39019]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.