Factsheet for TraesCS5D01G528400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G345500.1	Wheat	cytosol	99.3	98.83
TraesCS5B01G529300.1	Wheat	cytosol	98.83	98.83
TraesCS1A01G407700.5	Wheat	cytosol	98.83	98.36
Os03t0841800-01	Rice	mitochondrion	90.38	90.8
EER90544	Sorghum	cytosol	89.2	89.2
GSMUA_Achr4P16320_001	Banana	cytosol, mitochondrion	83.57	84.16
VIT_12s0035g01060.t01	Wine grape	cytosol	81.92	82.7
Solyc01g103430.2.1	Tomato	cytosol	81.69	82.46
PGSC0003DMT400064027	Potato	cytosol	73.94	82.25
KRH26299	Soybean	cytosol	80.28	81.43
KRH06055	Soybean	cytosol	79.81	80.95
CDY65729	Canola	plastid	79.58	80.52
Bra030803.1-P	Field mustard	plastid	79.58	80.52
CDY31060	Canola	plastid	79.34	80.28
AT1G09840.7	Thale cress	cytosol, plastid	79.34	80.28
CDX94939	Canola	cytosol	77.93	79.62
CDX93471	Canola	cytosol	77.93	79.62
Bra019983.1-P	Field mustard	cytosol	77.93	79.62
AT1G57870.3	Thale cress	cytosol	79.11	76.07
TraesCS3D01G177600.2	Wheat	cytosol	71.13	74.63
TraesCS5D01G512300.2	Wheat	cytosol	70.66	73.06
TraesCS1D01G079300.1	Wheat	cytosol	69.72	72.44
TraesCS1D01G129000.2	Wheat	cytosol	63.38	67.16
TraesCS3D01G137200.1	Wheat	cytosol	60.8	64.59
TraesCS1D01G187400.1	Wheat	cytosol, mitochondrion	69.72	63.19
Zm00001d012869_P005	Maize	mitochondrion	88.73	35.13
TraesCS2D01G260500.1	Wheat	cytosol	24.41	31.23
TraesCS4D01G254600.1	Wheat	cytosol	23.47	30.12
TraesCS5D01G410000.1	Wheat	plastid	23.94	26.77
TraesCS5D01G411100.1	Wheat	mitochondrion	24.18	24.94

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24057	PANTHER:PTHR24057:SF19	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS5D01G528400	EnsemblPlants:TraesCS5D01G528400.1	TIGR:cd14137	SEG:seg	:

Description

No Description!

Coordinates

chr5D:-:545211268..545214907

Molecular Weight (calculated)

48229.3 Da

IEP (calculated)

8.338

GRAVY (calculated)

-0.339

Length

426 amino acids

Sequence
(BLAST)

001: MAYSGQRHAG AAGSSSRQGN GLKGQASSVE FLGRGMVGMQ LRDAKPDDAD DERDNEPDVV ADSGSEAGQI IATTIRGRNG LPKQCVSYIA EHVVGTGSFG
101: VVFQAKCRET GEVVAIKKVL QDKRYKNREL QIMHMLDHPN IVGLKHYFFS TTERNELYLN LVLEFVPETV NRMARQYNRM NQRVPLIYVK LYTYQICRAL
201: AYIHNCVGIC HRDIKPQNVL VNPHTHQLKI CDFGSAKVLV KGEPNISYIC SRYYRAPELI FGATEYTTAI DLWSTGCVMA ELLLGQPLFP GESGVDQLVE
301: IIKVLGTPTR EEIKCMNPNY TEFKFPQIKA HPWHKVFQKK LPPEAMDLVS RFLQYSPDLR CTAMEACMHP FFDELRDPNT RLPNGRPLPP LFNFRSQELN
401: GIPPEVVERL VPEHARKQNL FMALRT

Best Arabidopsis Sequence Match ( AT1G57870.2 )
(BLAST)

001: MESHLGNGVG SSRSAKNTKN TSSSVDWLSR DMLEMKIRDK TEADEERDSE PDIIDGVGAE PGHVITTTLP GRNGQSRQTV SYIAEHVVGT GSFGMVFQAK
101: CRETGEVVAI KKVLQDKRYK NRELQIMQML DHPNVVCLKH SFYSRTENEE VYLNLVLEFV PETVNRTARS YSRMNQLMPL IYVKLYTYQI CRGLAYLHNC
201: CGLCHRDIKP QNLLVNPHTH QLKICDFGSA KVLVKGEPNI SYICSRYYRA PELIFGATEY TTAIDIWSTG CVMAELLLGQ PLFPGESGVD QLVEIIKVLG
301: TPTREEIKCM NPNYTEFKFP QIKPHPWHKV FQKRLPPEAV DLLCRFFQYS PNLRCTAVEA CIHPFFDELR DPNARLPNGR PLPPLFNFKP QELSGIPPET
401: VDRLVPEHAR KQNHFMALHS

Arabidopsis Description

ATSK42Shaggy-like kinase 42 [Source:UniProtKB/TrEMBL;Acc:F4I9N7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.