Factsheet for TraesCS4A01G345500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G528400.1	Wheat	cytosol	98.83	99.3
TraesCS1A01G407700.5	Wheat	cytosol	99.07	99.07
TraesCS5B01G529300.1	Wheat	cytosol	98.6	99.06
Os03t0841800-01	Rice	mitochondrion	90.19	91.04
EER90544	Sorghum	cytosol	89.02	89.44
GSMUA_Achr4P16320_001	Banana	cytosol, mitochondrion	82.71	83.69
Solyc01g103430.2.1	Tomato	cytosol	81.31	82.46
PGSC0003DMT400064027	Potato	cytosol	73.6	82.25
VIT_12s0035g01060.t01	Wine grape	cytosol	81.07	82.23
KRH26299	Soybean	cytosol	79.44	80.95
KRH06055	Soybean	cytosol	78.97	80.48
Bra030803.1-P	Field mustard	plastid	78.74	80.05
CDY65729	Canola	plastid	78.74	80.05
CDY31060	Canola	plastid	78.5	79.81
AT1G09840.7	Thale cress	cytosol, plastid	78.5	79.81
CDX93471	Canola	cytosol	77.1	79.14
CDX94939	Canola	cytosol	77.1	79.14
Bra019983.1-P	Field mustard	cytosol	77.1	79.14
AT1G57870.3	Thale cress	cytosol	78.27	75.62
TraesCS3A01G164200.1	Wheat	cytosol	69.86	73.65
TraesCS4A01G361100.1	Wheat	cytosol	70.09	73.53
TraesCS1A01G077200.1	Wheat	cytosol	68.93	71.95
TraesCS3A01G136500.1	Wheat	cytosol	62.15	70.37
TraesCS1A01G125000.1	Wheat	cytosol	62.85	66.92
TraesCS1A01G189000.1	Wheat	cytosol, mitochondrion	68.93	62.9
TraesCS5A01G259000.1	Wheat	endoplasmic reticulum, extracellular, plastid	10.75	40.0
TraesCS4A01G365100.1	Wheat	endoplasmic reticulum, extracellular, plastid	10.05	36.75
Zm00001d012869_P005	Maize	mitochondrion	88.55	35.22
TraesCS4A01G049900.1	Wheat	cytosol	23.6	30.42
TraesCS2A01G263400.1	Wheat	cytosol, nucleus	24.3	30.41
TraesCS5A01G400100.1	Wheat	cytosol, mitochondrion	23.83	26.77
TraesCS5A01G400900.1	Wheat	mitochondrion, plastid	24.3	25.24

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24057	PANTHER:PTHR24057:SF19	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS4A01G345500	EnsemblPlants:TraesCS4A01G345500.1	TIGR:cd14137	SEG:seg	:

Description

No Description!

Coordinates

chr4A:-:624933745..624937337

Molecular Weight (calculated)

48467.7 Da

IEP (calculated)

8.774

GRAVY (calculated)

-0.347

Length

428 amino acids

Sequence
(BLAST)

001: MAYSGQRHAG AAGSSSRQGN GLKGQASSVE FLGRGMVGMQ LRDAKPDDAD DERDNEPDVV ADSGSEAGQI IATTIRGRNG LPKQVKSVSY IAEHVVGTGS
101: FGVVFQAKCR ETGEVVAIKK VLQDKRYKNR ELQIMHMLDH PNIVGLKHYF FSTTERNELY LNLVLEFVPE TVNRMARQYN RMNQRVPLIY VKLYTYQICR
201: ALAYIHNCVG ICHRDIKPQN VLVNPHTHQL KICDFGSAKV LVKGEPNISY ICSRYYRAPE LIFGATEYTT AIDLWSTGCV MAKLLLGQPL FPGESGVDQL
301: VEIIKVLGTP TREEIKCMNP NYTEFKFPQI KAHPWHKVFQ KKLPPEAMDL VSRFLQYSPD LRCTAMEACM HPFFDELRDP NTRLPNGRPL PPLFNFRSQE
401: LNGIPPEVVE RLVPEHARRQ NLFMALRT

Best Arabidopsis Sequence Match ( AT1G57870.2 )
(BLAST)

001: MESHLGNGVG SSRSAKNTKN TSSSVDWLSR DMLEMKIRDK TEADEERDSE PDIIDGVGAE PGHVITTTLP GRNGQSRQTV SYIAEHVVGT GSFGMVFQAK
101: CRETGEVVAI KKVLQDKRYK NRELQIMQML DHPNVVCLKH SFYSRTENEE VYLNLVLEFV PETVNRTARS YSRMNQLMPL IYVKLYTYQI CRGLAYLHNC
201: CGLCHRDIKP QNLLVNPHTH QLKICDFGSA KVLVKGEPNI SYICSRYYRA PELIFGATEY TTAIDIWSTG CVMAELLLGQ PLFPGESGVD QLVEIIKVLG
301: TPTREEIKCM NPNYTEFKFP QIKPHPWHKV FQKRLPPEAV DLLCRFFQYS PNLRCTAVEA CIHPFFDELR DPNARLPNGR PLPPLFNFKP QELSGIPPET
401: VDRLVPEHAR KQNHFMALHS

Arabidopsis Description

ATSK42Shaggy-like kinase 42 [Source:UniProtKB/TrEMBL;Acc:F4I9N7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.