Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G404900.1 | Wheat | cytosol, mitochondrion | 98.95 | 98.95 |
| HORVU5Hr1G097230.1 | Barley | cytosol, plastid | 98.95 | 98.69 |
| TraesCS5D01G410000.1 | Wheat | plastid | 98.69 | 98.69 |
| TraesCS2A01G263400.1 | Wheat | cytosol, nucleus | 83.99 | 93.57 |
| KRH28388 | Soybean | cytosol | 81.1 | 92.79 |
| Solyc03g044140.2.1 | Tomato | cytosol, nucleus | 81.1 | 92.79 |
| GSMUA_Achr5P01690_001 | Banana | cytosol | 80.84 | 92.49 |
| KRH77093 | Soybean | nucleus | 80.84 | 92.49 |
| CDY70654 | Canola | cytosol | 41.47 | 91.86 |
| PGSC0003DMT400064191 | Potato | cytosol | 80.05 | 91.59 |
| Solyc02g092640.2.1 | Tomato | cytosol, nucleus | 80.05 | 91.59 |
| CDY30613 | Canola | cytosol | 79.79 | 91.29 |
| CDY57359 | Canola | cytosol | 79.53 | 91.27 |
| CDX83104 | Canola | cytosol | 78.74 | 91.19 |
| Bra029986.1-P | Field mustard | cytosol | 78.74 | 91.19 |
| CDY57680 | Canola | cytosol | 79.53 | 90.99 |
| VIT_18s0001g09320.t01 | Wine grape | cytosol | 79.0 | 90.39 |
| AT2G23080.1 | Thale cress | cytosol | 78.22 | 89.49 |
| EER90840 | Sorghum | plastid | 90.03 | 89.09 |
| Zm00001d034125_P002 | Maize | mitochondrion, plastid | 89.24 | 88.31 |
| Zm00001d013217_P001 | Maize | cytosol | 87.4 | 86.95 |
| TraesCS4A01G049900.1 | Wheat | cytosol | 75.07 | 86.14 |
| KRH04471 | Soybean | nucleus | 83.46 | 79.9 |
| Bra036806.1-P | Field mustard | cytosol | 69.82 | 78.93 |
| Bra036044.1-P | Field mustard | plasma membrane | 79.79 | 78.15 |
| CDX98044 | Canola | cytosol | 32.81 | 78.12 |
| VIT_07s0129g00410.t01 | Wine grape | golgi, plasma membrane | 82.41 | 77.53 |
| KRH58068 | Soybean | mitochondrion | 82.94 | 76.89 |
| AT3G50000.1 | Thale cress | golgi, plasma membrane, vacuole | 81.1 | 76.67 |
| AT5G67380.1 | Thale cress | golgi, plasma membrane | 81.1 | 75.55 |
| Bra031829.1-P | Field mustard | cytosol | 52.23 | 72.63 |
| CDY71648 | Canola | plastid | 28.08 | 66.46 |
| TraesCS5A01G400900.1 | Wheat | mitochondrion, plastid | 68.77 | 63.59 |
| CDY67469 | Canola | vacuole | 48.82 | 63.48 |
| CDY15289 | Canola | vacuole | 44.88 | 61.96 |
| Os03t0762000-01 | Rice | plastid | 23.36 | 61.38 |
| CDY29766 | Canola | golgi, plasma membrane | 56.96 | 61.3 |
| CDY25489 | Canola | golgi, plasma membrane | 50.92 | 39.92 |
| TraesCS3A01G136500.1 | Wheat | cytosol | 26.51 | 26.72 |
| TraesCS3A01G164200.1 | Wheat | cytosol | 27.82 | 26.11 |
| TraesCS1A01G125000.1 | Wheat | cytosol | 26.77 | 25.37 |
| TraesCS4A01G361100.1 | Wheat | cytosol | 25.98 | 24.26 |
| TraesCS1A01G077200.1 | Wheat | cytosol | 25.72 | 23.9 |
| TraesCS4A01G345500.1 | Wheat | cytosol | 26.77 | 23.83 |
| TraesCS1A01G407700.5 | Wheat | cytosol | 26.77 | 23.83 |
| TraesCS1A01G189000.1 | Wheat | cytosol, mitochondrion | 27.56 | 22.39 |
| TraesCS4A01G365100.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 4.46 | 14.53 |
| TraesCS5A01G259000.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 4.2 | 13.91 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.9.1 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24054 |
| PANTHER:PTHR24054:SF33 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| EnsemblPlantsGene:TraesCS5A01G400100 | EnsemblPlants:TraesCS5A01G400100.1 | TIGR:cd14132 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5A:-:593172545..593179035
Molecular Weight (calculated)
43956.8 Da
IEP (calculated)
9.196
GRAVY (calculated)
-0.443
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDAPPRKRP PASSVARAAA AVVVAALASS FVALSPRCAP ADAGSRPGMS KARVYTDVNV VRPKEYWDYE ALTVQWGEQD DYEVVRKVGR GKYSEVFEGF
101: SVNNSEKCVI KILKPVKKKK IKREIKILQN LCGGPNIIKL LDIVRDQHSK TPSLIFEYVN NTDFKVLYPT LTDYDIRYYL YELLKALDHC HSQGIMHRDV
201: KPHNVMIDHD LRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ DYDYSLDMWS LGCMFAGMIF RKEPFFYGHD NHDQLVKIAK VLGTDSLNAY
301: LKKYHLELDP QLEHLVGRHS RKPWSKFINA DNQHLVSPEA IDFLDKLLRY DHQDRLTARE AMAHPYFLQV RAAENSRARP Q
101: SVNNSEKCVI KILKPVKKKK IKREIKILQN LCGGPNIIKL LDIVRDQHSK TPSLIFEYVN NTDFKVLYPT LTDYDIRYYL YELLKALDHC HSQGIMHRDV
201: KPHNVMIDHD LRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ DYDYSLDMWS LGCMFAGMIF RKEPFFYGHD NHDQLVKIAK VLGTDSLNAY
301: LKKYHLELDP QLEHLVGRHS RKPWSKFINA DNQHLVSPEA IDFLDKLLRY DHQDRLTARE AMAHPYFLQV RAAENSRARP Q
001: MIDTLFFLFF LFFDSPLRRL LLLCAVLALR APTAHSPILR SSIVTPTARA VSEVSGCTTI DPDFLVEISD SNQTRAMSKA RVYTEVNVIR PKDYWDYESL
101: IVQWGEQDDY EVVRKVGRGK YSEVFEGINV NSKEKCIIKI LKPVKKKKIR REIKILQNLC GGPNIVKLLD VVRDQHSKTP SLIFEYVNST DFKVLYPTLT
201: DYDIRYYIYE LLKALDFCHS QGIMHRDVKP HNVMIDHELR KLRLIDWGLA EFYHPGKEYN VRVASRYFKG PELLVDLQDY DYSLDMWSLG CMFAGMIFRK
301: EPFFYGHDNQ DQLVKIAKVL GTDELNAYLN KYQLELDPQL EALVGRHSRK PWSKFINADN QHLVSPEAID FLDKLLRYDH QDRLTAKEAM AHAYFAQVRA
401: AETSRMRSQ
101: IVQWGEQDDY EVVRKVGRGK YSEVFEGINV NSKEKCIIKI LKPVKKKKIR REIKILQNLC GGPNIVKLLD VVRDQHSKTP SLIFEYVNST DFKVLYPTLT
201: DYDIRYYIYE LLKALDFCHS QGIMHRDVKP HNVMIDHELR KLRLIDWGLA EFYHPGKEYN VRVASRYFKG PELLVDLQDY DYSLDMWSLG CMFAGMIFRK
301: EPFFYGHDNQ DQLVKIAKVL GTDELNAYLN KYQLELDPQL EALVGRHSRK PWSKFINADN QHLVSPEAID FLDKLLRYDH QDRLTAKEAM AHAYFAQVRA
401: AETSRMRSQ
Arabidopsis Description
CKA1Casein kinase II subunit alpha-1 [Source:UniProtKB/Swiss-Prot;Acc:Q08467]
SUBAcon: [plasma membrane,golgi]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.