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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 2
  • plastid 4
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G001280.1
HORVU1Hr1G055250.1
HORVU2Hr1G016740.4
HORVU2Hr1G092930.1
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU4Hr1G090280.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4
HORVU7Hr1G070870.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G23080.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT2G23080.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT2G23080.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT2G23080.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT2G23080.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT2G23080.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT2G23080.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT2G23080.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT2G23080.1 HORVU0Hr1G001280.1 AT2G41100.1 17360592
AT2G23080.1 HORVU2Hr1G016740.4 AT2G41100.1 17360592
AT2G23080.1 HORVU3Hr1G038010.1 AT2G41100.1 17360592
AT2G23080.1 HORVU3Hr1G079210.4 AT2G41100.1 17360592
AT2G23080.1 HORVU4Hr1G026290.3 AT2G41100.1 17360592
AT2G23080.1 HORVU5Hr1G014060.1 AT2G41100.1 17360592
AT2G23080.1 HORVU5Hr1G014070.2 AT2G41100.1 17360592
AT2G23080.1 HORVU5Hr1G044710.4 AT2G41100.1 17360592
AT2G23080.1 HORVU0Hr1G001280.1 AT5G21274.1 17360592
AT2G23080.1 HORVU2Hr1G016740.4 AT5G21274.1 17360592
AT2G23080.1 HORVU3Hr1G038010.1 AT5G21274.1 17360592
AT2G23080.1 HORVU3Hr1G079210.4 AT5G21274.1 17360592
AT2G23080.1 HORVU4Hr1G026290.3 AT5G21274.1 17360592
AT2G23080.1 HORVU5Hr1G014060.1 AT5G21274.1 17360592
AT2G23080.1 HORVU5Hr1G014070.2 AT5G21274.1 17360592
AT2G23080.1 HORVU5Hr1G044710.4 AT5G21274.1 17360592
AT5G67380.1 HORVU7Hr1G070870.2 AT2G46830.1 14978263
AT5G67380.1 HORVU7Hr1G070870.2 AT2G46830.1 9724822
AT5G67380.1 HORVU1Hr1G055250.1 AT3G60250.1 10535927
AT5G67380.1 HORVU2Hr1G092930.1 AT3G60250.1 10535927
AT5G67380.1 HORVU4Hr1G090280.3 AT3G60250.1 10535927
AT5G67380.1 HORVU1Hr1G055250.1 AT5G47080.1 10535927
AT5G67380.1 HORVU2Hr1G092930.1 AT5G47080.1 10535927
AT5G67380.1 HORVU4Hr1G090280.3 AT5G47080.1 10535927
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G400100.1 Wheat cytosol, mitochondrion 98.69 98.95
TraesCS5B01G404900.1 Wheat cytosol, mitochondrion 98.69 98.95
TraesCS5D01G410000.1 Wheat plastid 98.43 98.69
HORVU2Hr1G063420.1 Barley cytosol 82.72 94.89
KRH28388 Soybean cytosol 80.89 92.79
Solyc03g044140.2.1 Tomato cytosol, nucleus 80.89 92.79
GSMUA_Achr5P01690_001 Banana cytosol 80.63 92.49
KRH77093 Soybean nucleus 80.63 92.49
CDY70654 Canola cytosol 41.36 91.86
Solyc02g092640.2.1 Tomato cytosol, nucleus 79.84 91.59
PGSC0003DMT400064191 Potato cytosol 79.84 91.59
CDY30613 Canola cytosol 79.58 91.29
CDY57359 Canola cytosol 79.32 91.27
CDX83104 Canola cytosol 78.53 91.19
Bra029986.1-P Field mustard cytosol 78.53 91.19
CDY57680 Canola cytosol 79.32 90.99
VIT_18s0001g09320.t01 Wine grape cytosol 78.8 90.39
AT2G23080.1 Thale cress cytosol 78.01 89.49
EER90840 Sorghum plastid 90.05 89.35
Zm00001d034125_P002 Maize mitochondrion, plastid 89.27 88.57
Zm00001d013217_P001 Maize cytosol 87.7 87.47
HORVU4Hr1G069390.1 Barley cytosol 75.39 86.75
KRH04471 Soybean nucleus 83.25 79.9
Bra036806.1-P Field mustard cytosol 69.63 78.93
Bra036044.1-P Field mustard plasma membrane 79.58 78.15
CDX98044 Canola cytosol 32.72 78.12
VIT_07s0129g00410.t01 Wine grape golgi, plasma membrane 82.2 77.53
AT3G50000.1 Thale cress golgi, plasma membrane, vacuole 81.15 76.92
KRH58068 Soybean mitochondrion 82.72 76.89
AT5G67380.1 Thale cress golgi, plasma membrane 81.15 75.79
HORVU4Hr1G030100.1 Barley cytosol 17.8 73.91
Bra031829.1-P Field mustard cytosol 52.09 72.63
CDY71648 Canola plastid 28.01 66.46
CDY67469 Canola vacuole 48.69 63.48
CDY15289 Canola vacuole 44.76 61.96
CDY29766 Canola golgi, plasma membrane 56.81 61.3
HORVU5Hr1G097400.2 Barley cytosol, mitochondrion, nucleus, plastid 68.06 60.75
Os03t0762000-01 Rice plastid 23.04 60.69
CDY25489 Canola golgi, plasma membrane 50.79 39.92
HORVU4Hr1G079520.3 Barley cytosol 19.11 29.32
HORVU3Hr1G034440.2 Barley cytosol 27.75 26.11
HORVU3Hr1G026020.3 Barley mitochondrion 26.96 24.88
HORVU5Hr1G117030.1 Barley cytosol 26.18 24.51
HORVU6Hr1G008360.2 Barley mitochondrion, peroxisome, plasma membrane 14.4 24.44
HORVU1Hr1G016490.9 Barley cytosol 25.65 23.9
HORVU2Hr1G051860.1 Barley cytosol 8.9 20.24
HORVU6Hr1G046490.1 Barley cytosol 6.54 19.84
HORVU1Hr1G048580.8 Barley cytosol, nucleus 26.96 18.07
HORVU7Hr1G035240.1 Barley cytosol 12.04 14.6
HORVU2Hr1G126490.4 Barley plastid 12.3 14.29
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.3.9.1Gene3D:3.30.200.20GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:HORVU5Hr1G097230EnsemblPlants:HORVU5Hr1G097230.1InterPro:IPR000719InterPro:Kinase-like_dom_sfUniProt:M0WZZ0PFAM:PF00069
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24054PANTHER:PTHR24054:SF33InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI00029666C5
SEG:seg:::::
Description
No Description!
Coordinates
chrchr5H:-:603612507..603618542
Molecular Weight (calculated)
43944.8 Da
IEP (calculated)
9.196
GRAVY (calculated)
-0.419
Length
382 amino acids
Sequence
(BLAST)
001: MSDAPPRKRP PASSVARASA AAVVVAALAS SFIALSPRCA PAAAGSGPSM SKARVYTDVN VVRPKEYWDY EALTVQWGEQ DDYEVVRKVG RGKYSEVFEG
101: FSVNNSEKCV IKILKPVKKK KIKREIKILQ NLCGGPNIIK LLDIVRDQHS KTPSLIFEYV NNTDFKVLYP TLTDYDIRYY LYELLKALDH CHSQGIMHRD
201: VKPHNVMIDH DLRKLRLIDW GLAEFYHPGK EYNVRVASRY FKGPELLVDL QDYDYSLDMW SLGCMFAGMI FRKEPFFYGH DNHDQLVKIA KVLGTDSLNA
301: YLKKYHLELD PQLEHLVGRH SRKPWSKFIN ADNQHLVSPE AIDFLDKLLR YDHQDRLTAR EAMAHPYFLQ VRAAENSRAR PQ
Best Arabidopsis Sequence Match ( AT5G67380.1 )
(BLAST)
001: MIDTLFFLFF LFFDSPLRRL LLLCAVLALR APTAHSPILR SSIVTPTARA VSEVSGCTTI DPDFLVEISD SNQTRAMSKA RVYTEVNVIR PKDYWDYESL
101: IVQWGEQDDY EVVRKVGRGK YSEVFEGINV NSKEKCIIKI LKPVKKKKIR REIKILQNLC GGPNIVKLLD VVRDQHSKTP SLIFEYVNST DFKVLYPTLT
201: DYDIRYYIYE LLKALDFCHS QGIMHRDVKP HNVMIDHELR KLRLIDWGLA EFYHPGKEYN VRVASRYFKG PELLVDLQDY DYSLDMWSLG CMFAGMIFRK
301: EPFFYGHDNQ DQLVKIAKVL GTDELNAYLN KYQLELDPQL EALVGRHSRK PWSKFINADN QHLVSPEAID FLDKLLRYDH QDRLTAKEAM AHAYFAQVRA
401: AETSRMRSQ
Arabidopsis Description
CKA1Casein kinase II subunit alpha-1 [Source:UniProtKB/Swiss-Prot;Acc:Q08467]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.