Factsheet for HORVU5Hr1G097400.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

plastid 2
nucleus 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G077940.1
HORVU3Hr1G030600.8
HORVU4Hr1G030100.1
HORVU5Hr1G097400.2
HORVU5Hr1G125110.10
HORVU6Hr1G050140.1
HORVU7Hr1G069520.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23070.1	HORVU7Hr1G069520.2	AT1G64860.1	22111690
AT2G23070.1	HORVU4Hr1G030100.1	AT2G23070.1	22111690
AT2G23070.1	HORVU5Hr1G097400.2	AT2G23070.1	22111690
AT2G23070.1	HORVU5Hr1G125110.10	AT2G36990.1	22111690
AT2G23070.1	HORVU2Hr1G077940.1	AT3G14180.1	21798944
AT2G23070.1	HORVU6Hr1G050140.1	AT3G14180.1	21798944
AT2G23070.1	HORVU3Hr1G030600.8	AT5G58720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G030100.1	Barley	cytosol	18.46	85.87
KXG37490	Sorghum	mitochondrion	76.87	80.05
Os03t0763000-01	Rice	plastid	75.7	79.41
Zm00001d034137_P001	Maize	plastid	71.03	77.55
HORVU2Hr1G063420.1	Barley	cytosol	59.58	76.58
KRH04448	Soybean	nucleus	60.51	74.64
HORVU4Hr1G069390.1	Barley	cytosol	57.24	73.8
CDX76880	Canola	cytosol, mitochondrion	59.11	72.91
HORVU5Hr1G097230.1	Barley	cytosol, plastid	60.75	68.06
KRH58076	Soybean	endoplasmic reticulum	59.58	65.05
GSMUA_Achr6P34710_001	Banana	golgi, plasma membrane, vacuole	60.28	64.02
VIT_07s0129g00270.t01	Wine grape	mitochondrion	63.32	63.92
CDY38928	Canola	plastid	59.58	63.59
Bra032182.1-P	Field mustard	plastid	59.58	63.59
Solyc02g064700.2.1	Tomato	plastid	62.85	63.0
Bra039942.1-P	Field mustard	plastid	61.68	62.86
CDY49445	Canola	plastid	61.68	62.71
AT2G23070.1	Thale cress	plastid	62.62	62.04
CDX89544	Canola	plastid	60.28	61.87
Zm00001d032025_P001	Maize	mitochondrion	27.57	59.6
KRH58078	Soybean	cytosol	2.57	57.89
GSMUA_Achr9P09590_001	Banana	mitochondrion, plastid	58.18	56.98
HORVU4Hr1G079520.3	Barley	cytosol	16.82	28.92
HORVU3Hr1G034440.2	Barley	cytosol	25.23	26.6
HORVU3Hr1G026020.3	Barley	mitochondrion	24.53	25.36
HORVU5Hr1G117030.1	Barley	cytosol	23.13	24.26
HORVU6Hr1G008360.2	Barley	mitochondrion, peroxisome, plasma membrane	12.62	24.0
HORVU1Hr1G016490.9	Barley	cytosol	22.9	23.9
HORVU2Hr1G051860.1	Barley	cytosol	7.94	20.24
HORVU1Hr1G048580.8	Barley	cytosol, nucleus	25.47	19.12
HORVU6Hr1G046490.1	Barley	cytosol	5.61	19.05
HORVU2Hr1G126490.4	Barley	plastid	11.68	15.2
HORVU7Hr1G035240.1	Barley	cytosol	10.51	14.29

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.9.1	Gene3D:3.30.200.20	UniProt:A0A287SFI6	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:HORVU5Hr1G097400	EnsemblPlants:HORVU5Hr1G097400.2	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24054	PANTHER:PTHR24054:SF33	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000B46E33F	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:604269464..604274712

Molecular Weight (calculated)

49781.6 Da

IEP (calculated)

9.195

GRAVY (calculated)

-0.537

Length

428 amino acids

Sequence
(BLAST)

001: LVRRSVSSPS SLAPSSSNCY MAWCALRSRL HPFSPSYAAA ATPHRLLLCL LSTAAPRHSH GHHHHRRRHS PTAYADESLR PMPPIGRATR HPAGATPIAR
101: VYADANSQRP KEYWDYEALD IVWGEQDGYE VLRKVGKGKY SEVFEGLRTG SEDRCVIKIL KPVRKKKIKR EIKILQNLYG GPNIIKLLDV VRDDGSKTPS
201: LIFEYVNNTD FRVLYPTLSD YDIRYYIFEL LKALDFSHSR GIMHRDVKPH NIMIDHEKRQ LRLIDWGLAE FYHPRMEYNV RVASRCYKGP ELLVDLQDYD
301: YSLDLWSLGC MFAAMIFHVD PFFHGQDNYQ QLVKITKVLG TEDFHSYLEK YGLRLDPQLE MLVGRHRRKP WEKFVDSGNR HLVSPEAIDF LDKLLRYDHQ
401: ERLTAKEAMA HPYFDPVRTS ESTRENVQ

Best Arabidopsis Sequence Match ( AT2G23070.1 )
(BLAST)

001: MALRPCTGFT ISSLRNASAA NNNLFSLLSF SSSSPAKRNL LLSSLQDNLR RFASSASLYR QHLRNQQQQH QQQQQSRVKE KSETLAQKIG KSIRRAGAPS
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ

Arabidopsis Description

CKA4Casein kinase II subunit alpha-4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64816]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.