Factsheet for Os03t0763000-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

plastid: 25316064

gfp PMID: 25316064 doi

Q Lu, S Ding, S Reiland, A Rödiger, B Roschitzki, P Xue, W Gruissem, C Lu, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, 8092 Zurich, Switzerland, Department of Biology, Plant Biotechnology, ETH Zurich, 8092 Zurich, Switzerland Functional Genomics Center Zurich, University of Zurich \ ETH Zurich, 8057 Zurich, Switzerland., Department of Biology, Plant Biotechnology, ETH Zurich, 8092 Zurich, Switzerland., Functional Genomics Center Zurich, University of Zurich \ ETH Zurich, 8057 Zurich, Switzerland., Institute of Biochemistry and Biotechnology, Martin-Luther-University Halle-Wittenberg, 06120 Halle (Saale), Germany., Laboratory of Protein and Peptide Pharmaceuticals, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China., Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0225100-01
Os02t0565000-01
Os03t0763000-01
Os04t0445600-00
Os08t0163400-01
Os08t0242800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23070.1	Os08t0163400-01	AT1G64860.1	22111690
AT2G23070.1	Os03t0763000-01	AT2G23070.1	22111690
AT2G23070.1	Os08t0242800-01	AT2G36990.1	22111690
AT2G23070.1	Os02t0565000-01	AT3G14180.1	21798944
AT2G23070.1	Os04t0445600-00	AT3G14180.1	21798944
AT2G23070.1	Os01t0225100-01	AT5G58720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37490	Sorghum	mitochondrion	86.27	85.64
Zm00001d034137_P001	Maize	plastid	80.88	84.18
TraesCS5A01G400900.1	Wheat	mitochondrion, plastid	81.37	80.58
TraesCS5D01G411100.1	Wheat	mitochondrion	81.13	80.15
TraesCS5B01G405700.1	Wheat	mitochondrion, plastid	80.88	79.9
HORVU4Hr1G030100.1	Barley	cytosol	17.89	79.35
KRH04448	Soybean	nucleus	64.95	76.37
Os07t0114400-01	Rice	plasma membrane	62.25	76.28
HORVU5Hr1G097400.2	Barley	cytosol, mitochondrion, nucleus, plastid	79.41	75.7
CDX76880	Canola	cytosol, mitochondrion	63.73	74.93
Os03t0207300-01	Rice	cytosol	60.29	74.1
KRH58076	Soybean	endoplasmic reticulum	64.22	66.84
GSMUA_Achr6P34710_001	Banana	golgi, plasma membrane, vacuole	65.69	66.5
Bra032182.1-P	Field mustard	plastid	64.95	66.08
CDY38928	Canola	plastid	64.95	66.08
VIT_07s0129g00270.t01	Wine grape	mitochondrion	67.89	65.33
Bra039942.1-P	Field mustard	plastid	66.42	64.52
Solyc02g064700.2.1	Tomato	plastid	67.4	64.4
CDY49445	Canola	plastid	66.42	64.37
CDX89544	Canola	plastid	65.2	63.79
Zm00001d032025_P001	Maize	mitochondrion	30.64	63.13
AT2G23070.1	Thale cress	plastid	65.93	62.27
GSMUA_Achr9P09590_001	Banana	mitochondrion, plastid	63.48	59.27
Os03t0762000-01	Rice	plastid	18.87	53.1
KRH58078	Soybean	cytosol	2.21	47.37
Os01t0205700-01	Rice	cytosol	16.91	29.61
Os01t0252100-02	Rice	cytosol, plasma membrane	26.72	26.72
Os05t0207500-01	Rice	cytosol	25.25	25.62
Os06t0547900-02	Rice	cytosol	25.25	25.56
Os02t0236200-01	Rice	cytosol	25.0	25.44
Os05t0134000-03	Rice	cytosol	24.75	24.57
Os03t0841800-01	Rice	mitochondrion	25.0	24.06
Os01t0296100-01	Rice	cytosol	24.02	24.02
Os10t0521700-01	Rice	cytosol, mitochondrion	26.23	22.81
Os01t0252200-01	Rice	nucleus	6.62	16.17

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.9.1	Gene3D:3.30.200.20	EntrezGene:4334206	ProteinID:AAL34126.1	ProteinID:ABF99024.1
EMBL:AK120812	ProteinID:BAF13278.1	ProteinID:BAS86528.1	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0010019	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0040007	GO:GO:0040008	GO:GO:2000028
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os03g0763000	EnsemblPlants:Os03t0763000-01	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24054	PANTHER:PTHR24054:SF33	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
UniProt:Q8W5G9	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	UniParc:UPI00000A138B
RefSeq:XP_015628120.1	SEG:seg	:	:	:	:

Description

casein kinase II alpha-subunit 4, CK2 alpha-subunit 4, CK2 alpha subunit 4Similar to Casein kinase II alpha subunit. (Os03t0763000-01)

Coordinates

chr3:+:31566050..31570471

Molecular Weight (calculated)

47259.7 Da

IEP (calculated)

9.032

GRAVY (calculated)

-0.501

Length

408 amino acids

Sequence
(BLAST)

001: MAWCAARSRL LPLATAPQLL RRLLLSSAAA PRYAHPHHHH SNSRRRRRPL APTVYAAAAA AAAEAPLPMP PRIGRATRHP GGAASVARVY ADANSQRPKE
101: YWDYESLDIE WGEQDGYEVL RKLGRGKYSE VFEGFRPGGD ERCVIKILKP VKKKKIKREI KILQNLYGGP NIVKLLDVVR DDESKTPSLI FEYVNNTDFK
201: VLYPTLLDYD IRYYIYELLK ALDYCHSRGI MHRDVKPHNI MIDHEKRQLC LIDWGLAEFY HPKMEYNARV ASRSYKGPEL LVDLLDYDYS LDLWSLGCMF
301: AAMIFRVDPF FNGQDNYDQL VKITEVLGTE DFYNYLEKYG LELDPQLERL VGRHNRKPWS MFVNSGNRHL ASPEAIDFVD RLLRYDHQER PTAKEAMAHP
401: YFNPVRST

Best Arabidopsis Sequence Match ( AT2G23070.1 )
(BLAST)

001: MALRPCTGFT ISSLRNASAA NNNLFSLLSF SSSSPAKRNL LLSSLQDNLR RFASSASLYR QHLRNQQQQH QQQQQSRVKE KSETLAQKIG KSIRRAGAPS
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ

Arabidopsis Description

CKA4Casein kinase II subunit alpha-4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64816]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.