CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX71154
CDX75751
CDX76880
CDX79708
CDX89544
CDY02832
CDY18468
CDY32688
CDY33246
CDY38928
CDY39099
CDY39101
CDY49445
CDY52962
CDY56127
CDY61025
CDY66142

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23070.1	CDY52962	AT1G64860.1	22111690
AT2G23070.1	CDY56127	AT1G64860.1	22111690
AT2G23070.1	CDX76880	AT2G23070.1	22111690
AT2G23070.1	CDX89544	AT2G23070.1	22111690
AT2G23070.1	CDY38928	AT2G23070.1	22111690
AT2G23070.1	CDY49445	AT2G23070.1	22111690
AT2G23070.1	CDX79708	AT2G36990.1	22111690
AT2G23070.1	CDY18468	AT2G36990.1	22111690
AT2G23070.1	CDY66142	AT2G36990.1	22111690
AT2G23070.1	CDX75751	AT3G14180.1	21798944
AT2G23070.1	CDY33246	AT3G14180.1	21798944
AT2G23070.1	CDY39099	AT3G14180.1	21798944
AT2G23070.1	CDY39101	AT3G14180.1	21798944
AT2G23070.1	CDX71154	AT5G58720.1	21798944
AT2G23070.1	CDY02832	AT5G58720.1	21798944
AT2G23070.1	CDY32688	AT5G58720.1	21798944
AT2G23070.1	CDY61025	AT5G58720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039942.1-P	Field mustard	plastid	99.05	99.29
CDX76880	Canola	cytosol, mitochondrion	81.47	98.85
CDY38928	Canola	plastid	88.84	93.27
CDX89544	Canola	plastid	90.97	91.85
KRH04448	Soybean	nucleus	75.3	91.35
AT2G23070.1	Thale cress	plastid	92.4	90.05
CDX83104	Canola	cytosol	66.75	85.41
CDY57359	Canola	cytosol	66.98	84.94
CDY57680	Canola	cytosol	66.98	84.68
CDY30613	Canola	cytosol	66.98	84.68
CDY70654	Canola	cytosol	33.49	81.98
KRH58076	Soybean	endoplasmic reticulum	74.35	79.85
KRH58078	Soybean	cytosol	3.56	78.95
VIT_07s0129g00270.t01	Wine grape	mitochondrion	79.33	78.77
Solyc02g064700.2.1	Tomato	plastid	79.57	78.45
CDX98044	Canola	cytosol	29.22	76.88
HORVU4Hr1G030100.1	Barley	cytosol	16.63	76.09
GSMUA_Achr6P34710_001	Banana	golgi, plasma membrane, vacuole	72.21	75.43
GSMUA_Achr9P09590_001	Banana	mitochondrion, plastid	71.26	68.65
KXG37490	Sorghum	mitochondrion	65.32	66.91
Os03t0763000-01	Rice	plastid	64.37	66.42
Zm00001d034137_P001	Maize	plastid	60.81	65.31
TraesCS5B01G405700.1	Wheat	mitochondrion, plastid	63.18	64.41
TraesCS5A01G400900.1	Wheat	mitochondrion, plastid	62.71	64.08
TraesCS5D01G411100.1	Wheat	mitochondrion	62.47	63.68
CDY67469	Canola	vacuole	43.71	62.8
HORVU5Hr1G097400.2	Barley	cytosol, mitochondrion, nucleus, plastid	62.71	61.68
CDY15289	Canola	vacuole	40.38	61.59
Zm00001d032025_P001	Maize	mitochondrion	28.5	60.61
CDY29766	Canola	golgi, plasma membrane	50.36	59.89
CDY71648	Canola	plastid	22.57	59.01
CDY25489	Canola	golgi, plasma membrane	42.28	36.63
CDY10766	Canola	extracellular, plasma membrane, vacuole	14.96	28.12
CDY69647	Canola	cytosol	21.62	26.76
CDY66894	Canola	cytosol	23.52	26.47
CDX70574	Canola	cytosol	25.18	25.92
CDX80585	Canola	cytosol	24.7	25.87
CDX78587	Canola	cytosol	25.18	25.85
CDX88238	Canola	cytosol	24.7	25.81
CDY34051	Canola	cytosol	23.28	25.79
CDX87033	Canola	cytosol	24.7	25.62
CDY19757	Canola	cytosol	24.7	25.62
CDX78886	Canola	cytosol	22.57	25.4
CDY70859	Canola	cytosol	22.57	25.4
CDY64921	Canola	cytosol	22.57	25.4
CDY05202	Canola	cytosol	24.7	25.37
CDY49981	Canola	cytosol	24.7	25.3
CDX74129	Canola	cytosol	24.7	25.3
CDX99437	Canola	cytosol	22.8	25.2
CDX97773	Canola	cytosol	24.47	25.12
CDY18828	Canola	cytosol	23.99	25.0
CDX93471	Canola	cytosol	23.52	23.74
CDX94939	Canola	cytosol	23.52	23.74
CDY72370	Canola	cytosol	5.94	23.58
CDY31060	Canola	plastid	23.28	23.28
CDY65729	Canola	plastid	23.28	23.28
CDY52692	Canola	cytosol, mitochondrion, nucleus	6.18	23.01
CDX91895	Canola	mitochondrion	25.18	22.75
CDX74346	Canola	cytosol, mitochondrion	25.18	22.65
CDY07202	Canola	mitochondrion	25.18	22.51
CDY51144	Canola	mitochondrion	25.18	22.18
CDY65303	Canola	mitochondrion	22.57	21.74
CDY45686	Canola	mitochondrion	22.09	21.53
CDX67856	Canola	mitochondrion	22.09	21.53
CDY52332	Canola	mitochondrion	22.33	21.51
CDY62551	Canola	cytosol	12.83	20.45
CDY27737	Canola	cytosol	24.7	20.23
CDX77348	Canola	plastid	8.31	20.0
CDX78658	Canola	cytosol, nucleus, peroxisome	22.57	16.73

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.9.1	Gene3D:3.30.200.20	GO:A0A078IEW0	UniProt:A0A078IEW0	EnsemblPlants:CDY49445
ProteinID:CDY49445	ProteinID:CDY49445.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00093031001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24054	PANTHER:PTHR24054:SF33	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE8D02	SEG:seg	:	:	:

Description

BnaA09g42220DBnaA09g42220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IEW0]

Coordinates

chrLK032833:-:101208..103931

Molecular Weight (calculated)

48720.3 Da

IEP (calculated)

9.805

GRAVY (calculated)

-0.546

Length

421 amino acids

Sequence
(BLAST)

001: MAFRPYGFTI SSSLRNASAA NGRLFSFLST SPSSSNLLSS LRGFASSASL YRQHLRHQQQ QQSRAKGLDK PETMAQKIGK SIRRAGAPSK ARVYADVNVV
101: RPKEYWDYES LAVQWGVQDD YEVVRKVGRG KYSEVFEGIH ATDDEKCVIK ILKPVKKKKI KREIKILQNL CGGPNIVKLL DIVRDQQSKT PSLIFEHVNN
201: KDFKVLYPTL SDYDVRYYIY ELLKALDFCH SRGIMHRDVK PHNVMIDHEQ RKLRLIDWGL AEFYHPGKEY NVRVASSRYF KGPELLVDLQ DYDYSLDLWS
301: LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNTY LTRYRIELDP NLASLVGRHS RKPWSKFINS ENQHLAVPEA VDFVDKLLKY DHQERPTAKE
401: AMAHPYFYPI RNAESSRTTR G

Best Arabidopsis Sequence Match ( AT2G23070.1 )
(BLAST)

001: MALRPCTGFT ISSLRNASAA NNNLFSLLSF SSSSPAKRNL LLSSLQDNLR RFASSASLYR QHLRNQQQQH QQQQQSRVKE KSETLAQKIG KSIRRAGAPS
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ

Arabidopsis Description

CKA4Casein kinase II subunit alpha-4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64816]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.