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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX78886
CDX86939
CDX87230
CDX99437
CDY00245
CDY16798
CDY34051
CDY62551
CDY64921
CDY67247
CDY69647
CDY70859

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G18710.1 CDX78886 AT4G18710.1 18599455
AT4G18710.1 CDX99437 AT4G18710.1 18599455
AT4G18710.1 CDY34051 AT4G18710.1 18599455
AT4G18710.1 CDY62551 AT4G18710.1 18599455
AT4G18710.1 CDY64921 AT4G18710.1 18599455
AT4G18710.1 CDY69647 AT4G18710.1 18599455
AT4G18710.1 CDY70859 AT4G18710.1 18599455
AT4G18710.1 CDX86939 AT5G62000.1 18599455
AT4G18710.1 CDX87230 AT5G62000.1 18599455
AT4G18710.1 CDY00245 AT5G62000.1 18599455
AT4G18710.1 CDY16798 AT5G62000.1 18599455
AT4G18710.1 CDY67247 AT5G62000.1 18599455
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020994.1-P Field mustard cytosol 99.74 99.74
CDY69647 Canola cytosol 89.21 99.71
CDX78886 Canola cytosol 97.37 98.93
CDY70859 Canola cytosol 97.11 98.66
AT4G18710.1 Thale cress cytosol 98.42 98.42
CDY64921 Canola cytosol 96.58 98.13
CDX99437 Canola cytosol 98.16 97.9
CDY62551 Canola cytosol 67.11 96.59
VIT_10s0003g01480.t01 Wine grape cytosol 90.26 90.26
PGSC0003DMT400073091 Potato cytosol 89.47 89.01
Solyc02g072300.2.1 Tomato cytosol 89.47 89.01
KRH61707 Soybean cytosol 88.95 88.95
KRH52380 Soybean cytosol 87.89 87.89
KRH21245 Soybean cytosol 86.32 87.7
KRH11042 Soybean cytosol 87.11 87.11
CDY66894 Canola cytosol 85.26 86.63
Solyc03g006070.2.1 Tomato cytosol 86.84 86.39
PGSC0003DMT400068764 Potato cytosol 86.84 86.39
Os01t0205700-01 Rice cytosol 52.63 85.84
TraesCS3A01G136500.1 Wheat cytosol 84.74 85.19
Os05t0207500-01 Rice cytosol 84.47 79.85
CDX97773 Canola cytosol 86.05 79.76
EES00093 Sorghum cytosol 84.47 79.46
CDY10766 Canola extracellular, plasma membrane, vacuole 46.58 79.02
TraesCS1A01G125000.1 Wheat cytosol 83.42 78.86
TraesCS1D01G129000.2 Wheat cytosol 83.42 78.86
TraesCS1B01G142300.1 Wheat cytosol 83.42 78.86
Zm00001d008893_P001 Maize cytosol 84.21 78.82
CDY52692 Canola cytosol, mitochondrion, nucleus 23.42 78.76
KRH58985 Soybean cytosol 78.95 78.33
KRH42881 Soybean cytosol 78.68 78.07
HORVU3Hr1G026020.3 Barley mitochondrion 84.74 77.78
TraesCS3D01G137200.1 Wheat cytosol 80.26 76.06
Zm00001d039407_P001 Maize cytosol 83.68 74.13
CDX70574 Canola cytosol 78.95 73.35
CDX78587 Canola cytosol 78.95 73.17
HORVU6Hr1G046490.1 Barley cytosol 23.95 72.22
CDX80585 Canola cytosol 76.05 71.89
CDX88238 Canola cytosol 75.79 71.46
CDY05202 Canola cytosol 76.84 71.22
CDX87033 Canola cytosol 75.79 70.94
CDY19757 Canola cytosol 75.79 70.94
CDY49981 Canola cytosol 76.05 70.32
CDX74129 Canola cytosol 76.05 70.32
HORVU6Hr1G008360.2 Barley mitochondrion, peroxisome, plasma membrane 40.26 68.0
HORVU2Hr1G051860.1 Barley cytosol 29.74 67.26
CDY18828 Canola cytosol 71.32 67.08
CDY72370 Canola cytosol 18.68 66.98
CDY65729 Canola plastid 67.63 61.05
CDY31060 Canola plastid 67.37 60.81
CDX93471 Canola cytosol 66.32 60.43
CDX94939 Canola cytosol 66.32 60.43
CDX91895 Canola mitochondrion 72.11 58.8
CDY45686 Canola mitochondrion 66.58 58.56
CDX67856 Canola mitochondrion 66.58 58.56
CDX74346 Canola cytosol, mitochondrion 72.11 58.55
CDY07202 Canola mitochondrion 72.11 58.17
CDY52332 Canola mitochondrion 66.58 57.89
CDY51144 Canola mitochondrion 72.63 57.74
CDY65303 Canola mitochondrion 66.05 57.44
CDY27737 Canola cytosol 76.84 56.81
CDX77348 Canola plastid 25.53 55.43
CDX78658 Canola cytosol, nucleus, peroxisome 70.0 46.83
TraesCS5A01G259000.1 Wheat endoplasmic reticulum, extracellular, plastid 13.16 43.48
TraesCS1B01G361800.1 Wheat endoplasmic reticulum, extracellular, plastid 12.89 42.61
TraesCS5B01G230700.1 Wheat endoplasmic reticulum, extracellular, plastid 12.89 41.88
TraesCS4A01G365100.1 Wheat endoplasmic reticulum, extracellular, plastid 12.63 41.03
CDY70654 Canola cytosol 16.58 36.63
CDY30613 Canola cytosol 26.58 30.33
CDY57359 Canola cytosol 26.32 30.12
CDX83104 Canola cytosol 26.05 30.09
CDY57680 Canola cytosol 26.32 30.03
CDX76880 Canola cytosol, mitochondrion 25.79 28.24
CDY71648 Canola plastid 11.58 27.33
CDX98044 Canola cytosol 11.05 26.25
CDY38928 Canola plastid 25.26 23.94
CDX89544 Canola plastid 25.79 23.5
CDY49445 Canola plastid 25.79 23.28
CDY67469 Canola vacuole 16.05 20.82
CDY15289 Canola vacuole 14.74 20.29
CDY29766 Canola golgi, plasma membrane 17.63 18.93
CDY25489 Canola golgi, plasma membrane 16.32 12.76
Protein Annotations
Gene3D:1.10.510.10MapMan:11.3.2.3MapMan:18.4.3.4Gene3D:3.30.200.20GO:A0A078H8D0UniProt:A0A078H8D0
EnsemblPlants:CDY34051ProteinID:CDY34051ProteinID:CDY34051.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00055928001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24057PANTHER:PTHR24057:SF12InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE26F0::
Description
BnaC03g62810DBnaC03g62810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8D0]
Coordinates
chrLK032327:-:16540..19376
Molecular Weight (calculated)
43084.4 Da
IEP (calculated)
8.400
GRAVY (calculated)
-0.179
Length
380 amino acids
Sequence
(BLAST)
001: MADDKEVPAA VVNGHDQVTG HIISTTIGGK NGEPKQTISY MAERVVGTGS FGIVFQAKCL ETGETVAIKK VLQDRRYKNR ELQLMRVMDH PNVVCLKHCF
101: FSTTSKDELF LNLVMEYVPE SLYRVLKHYS TANQRMPLVY VKLYMYQIFR GLAYMHNVAG VCHRDLKPQN LLVDPLTHQV KICDFGSAKQ LVKGEANISY
201: ICSRFYRAPE LIFGATEYTT SIDIWSAGCV LAELLLGQPL FPGENAVDQL VEIIKVLGTP TREEIRCMNP HYTDFRFPQI KAHPWHKIFH KRMPPEAIDF
301: ASRLLQYSPS LRCTALEACA HPFFDELREP NARLPNGRPF PPIFNFKQEV AGASPELVNK LIPDHIKRQL GLSFLNQSGT
Best Arabidopsis Sequence Match ( AT4G18710.1 )
(BLAST)
001: MADDKEMPAA VVDGHDQVTG HIISTTIGGK NGEPKQTISY MAERVVGTGS FGIVFQAKCL ETGETVAIKK VLQDRRYKNR ELQLMRVMDH PNVVCLKHCF
101: FSTTSKDELF LNLVMEYVPE SLYRVLKHYS SANQRMPLVY VKLYMYQIFR GLAYIHNVAG VCHRDLKPQN LLVDPLTHQV KICDFGSAKQ LVKGEANISY
201: ICSRFYRAPE LIFGATEYTT SIDIWSAGCV LAELLLGQPL FPGENAVDQL VEIIKVLGTP TREEIRCMNP HYTDFRFPQI KAHPWHKIFH KRMPPEAIDF
301: ASRLLQYSPS LRCTALEACA HPFFDELREP NARLPNGRPF PPLFNFKQEV AGSSPELVNK LIPDHIKRQL GLSFLNQSGT
Arabidopsis Description
ASK7Shaggy-related protein kinase eta [Source:UniProtKB/Swiss-Prot;Acc:Q39011]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.