CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH11042
KRH21245
KRH41062
KRH42881
KRH52380
KRH54110
KRH58985
KRH59742
KRH61707
KRH63855

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G18710.1	KRH11042	AT4G18710.1	18599455
AT4G18710.1	KRH21245	AT4G18710.1	18599455
AT4G18710.1	KRH42881	AT4G18710.1	18599455
AT4G18710.1	KRH52380	AT4G18710.1	18599455
AT4G18710.1	KRH58985	AT4G18710.1	18599455
AT4G18710.1	KRH61707	AT4G18710.1	18599455
AT4G18710.1	KRH41062	AT5G62000.1	18599455
AT4G18710.1	KRH54110	AT5G62000.1	18599455
AT4G18710.1	KRH59742	AT5G62000.1	18599455
AT4G18710.1	KRH63855	AT5G62000.1	18599455

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42881	Soybean	cytosol	95.82	95.82
KRH61707	Soybean	cytosol	82.51	83.16
KRH21245	Soybean	cytosol	80.68	82.62
KRH52380	Soybean	cytosol	81.46	82.11
KRH11042	Soybean	cytosol	80.68	81.32
CDY69647	Canola	cytosol	72.06	81.18
VIT_10s0003g01480.t01	Wine grape	cytosol	80.16	80.79
Os01t0205700-01	Rice	cytosol	48.83	80.26
Bra013341.1-P	Field mustard	cytosol	78.33	80.21
CDX78886	Canola	cytosol	78.33	80.21
CDY64921	Canola	cytosol	78.07	79.95
CDY70859	Canola	cytosol	78.07	79.95
Bra012581.1-P	Field mustard	cytosol	77.81	79.68
Bra020994.1-P	Field mustard	cytosol	78.33	78.95
AT4G18710.1	Thale cress	cytosol	78.33	78.95
CDY34051	Canola	cytosol	78.33	78.95
CDX99437	Canola	cytosol	78.07	78.48
CDY62551	Canola	cytosol	54.05	78.41
PGSC0003DMT400073091	Potato	cytosol	77.81	78.01
Solyc02g072300.2.1	Tomato	cytosol	77.81	78.01
PGSC0003DMT400068764	Potato	cytosol	76.5	76.7
Solyc03g006070.2.1	Tomato	cytosol	76.5	76.7
TraesCS3A01G136500.1	Wheat	cytosol	75.46	76.45
Os05t0207500-01	Rice	cytosol	75.98	72.39
TraesCS1D01G129000.2	Wheat	cytosol	75.98	72.39
KRH21176	Soybean	cytosol	49.09	72.31
TraesCS1A01G125000.1	Wheat	cytosol	75.72	72.14
TraesCS1B01G142300.1	Wheat	cytosol	75.72	72.14
EES00093	Sorghum	cytosol	74.41	70.54
KRH55721	Soybean	cytosol	76.76	70.17
KRH25797	Soybean	cytosol	76.76	70.0
Zm00001d008893_P001	Maize	cytosol	74.15	69.95
HORVU3Hr1G026020.3	Barley	mitochondrion	75.46	69.81
TraesCS3D01G137200.1	Wheat	cytosol	72.32	69.08
KRH27067	Soybean	cytosol	73.11	68.46
KRH22265	Soybean	cytosol	73.89	67.87
Zm00001d039407_P001	Maize	cytosol	73.63	65.73
HORVU6Hr1G008360.2	Barley	mitochondrion, peroxisome, plasma membrane	38.38	65.33
KRH70115	Soybean	cytosol	58.49	64.55
HORVU6Hr1G046490.1	Barley	cytosol	21.15	64.29
KRH68409	Soybean	cytosol	68.15	64.29
KRG96686	Soybean	cytosol	68.15	64.29
KRH33767	Soybean	cytosol	67.62	63.17
KRH31752	Soybean	cytosol	67.36	63.08
KRG90477	Soybean	cytosol	67.36	60.56
HORVU2Hr1G051860.1	Barley	cytosol	26.37	60.12
KRH62838	Soybean	cytosol, mitochondrion	12.79	59.76
KRH69166	Soybean	cytosol	68.41	58.09
KRH06055	Soybean	cytosol	62.66	57.14
KRH26299	Soybean	cytosol	62.66	57.14
KRH48234	Soybean	cytosol, mitochondrion	66.06	53.83
KRH40543	Soybean	mitochondrion	64.23	53.48
KRH65140	Soybean	mitochondrion	65.27	53.19
KRH00638	Soybean	mitochondrion	63.45	52.03
KRH75231	Soybean	cytosol	12.01	46.0
TraesCS5A01G259000.1	Wheat	endoplasmic reticulum, extracellular, plastid	12.01	40.0
TraesCS1B01G361800.1	Wheat	endoplasmic reticulum, extracellular, plastid	11.75	39.13
TraesCS5B01G230700.1	Wheat	endoplasmic reticulum, extracellular, plastid	11.75	38.46
TraesCS4A01G365100.1	Wheat	endoplasmic reticulum, extracellular, plastid	11.49	37.61
KRH12527	Soybean	cytosol, endoplasmic reticulum, plasma membrane	20.63	34.8
KRH58078	Soybean	cytosol	1.57	31.58
KRH32741	Soybean	mitochondrion	17.23	29.07
KRH28388	Soybean	cytosol	23.5	27.03
KRH77093	Soybean	nucleus	23.5	27.03
KRH04448	Soybean	nucleus	23.76	26.22
KRH04471	Soybean	nucleus	24.02	23.12
KRH58068	Soybean	mitochondrion	24.02	22.38
KRH58076	Soybean	endoplasmic reticulum	22.19	21.68

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100810237	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20	EMBL:ACUP02003297
EnsemblPlantsGene:GLYMA_05G159400	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	UniProt:K7KQI5
EnsemblPlants:KRH58985	ProteinID:KRH58985	ProteinID:KRH58985.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24057	PANTHER:PTHR24057:SF5	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002948CF5	:	:

Description

hypothetical protein

Coordinates

chr5:+:35141099..35145319

Molecular Weight (calculated)

42980.1 Da

IEP (calculated)

7.257

GRAVY (calculated)

-0.135

Length

383 amino acids

Sequence
(BLAST)

001: MSDHNHKISN SAVNGNDSLN GHIISTTVGG KNGKPKQTKS YMAECIVGTG SFGIVFLAKC LETGEPVAIK KVLLDKRYKN RELQLMRLMD HPNVISLKHR
101: FFSTTSADEL FLNLVMEYVP ESMYRVSKFY SNTNQSMPLI YVKLYMHQIF RGLAYIHTVP GVCHRDLKPQ NILVDPLTHQ VKICDFGSAK VLVKGEANIS
201: HICSLFYRAP ELMFGATEYT TSIDIWSAGC VLAELLLGQP LFPGENALDQ LVEIIKVLGT PAQEEVSCTN PTYNDFKFPQ IFHEKMPPEA IDLASRLLQY
301: SPSLRCTALE ACAHPFFDEL REPNAHLPDG RPFPPLFNFK QELSGASPEL IDKLIPDHVK RQIGIQHAHL TGFLEHDVKL SKV

Best Arabidopsis Sequence Match ( AT1G06390.1 )
(BLAST)

001: MASLPLGPQP HALAPPLQLH DGDALKRRPE LDSDKEMSAA VIEGNDAVTG HIISTTIGGK NGEPKQTISY MAERVVGTGS FGIVFQAKCL ETGESVAIKK
101: VLQDRRYKNR ELQLMRPMDH PNVISLKHCF FSTTSRDELF LNLVMEYVPE TLYRVLRHYT SSNQRMPIFY VKLYTYQIFR GLAYIHTVPG VCHRDVKPQN
201: LLVDPLTHQV KLCDFGSAKV LVKGEPNISY ICSRYYRAPE LIFGATEYTA SIDIWSAGCV LAELLLGQPL FPGENSVDQL VEIIKVLGTP TREEIRCMNP
301: NYTDFRFPQI KAHPWHKVFH KRMPPEAIDL ASRLLQYSPS LRCTALEACA HPFFNELREP NARLPNGRPL PPLFNFKQEL GGASMELINR LIPEHVRRQM
401: STGLQNS

Arabidopsis Description

ASK9SK22 [Source:UniProtKB/TrEMBL;Acc:A0A178WCN5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.